MirGeneDB 2.1
MirGeneDB ID

Xla-Mir-26-P4a

Family name MIR-26 (all species)
Seed UCAAGUA
Species African clawed frog (Xenopus laevis)
MiRBase ID xla-mir-26-1
Paralogues Xla-Mir-26-P1c  Xla-Mir-26-P1d  Xla-Mir-26-P2e  Xla-Mir-26-P2f  Xla-Mir-26-P4b 
Orthologues Aca-Mir-26-P4  Ami-Mir-26-P4  Bta-Mir-26-P4  Cfa-Mir-26-P4  Cpi-Mir-26-P4  Cpo-Mir-26-P4  Dno-Mir-26-P4  Dre-Mir-26-P4  Ete-Mir-26-P4  Gga-Mir-26-P4  Gja-Mir-26-P4  Gmo-Mir-26-P4  Hsa-Mir-26-P4  Lch-Mir-26-P4  Loc-Mir-26-P4  Mal-Mir-26-P4  Mdo-Mir-26-P4  Mml-Mir-26-P4  Mmu-Mir-26-P4  Mun-Mir-26-P4  Oan-Mir-26-P4  Ocu-Mir-26-P4  Pbv-Mir-26-P4  Pma-Mir-26-o4  Rno-Mir-26-P4  Sha-Mir-26-P4  Spt-Mir-26-P4  Sto-Mir-26-P4  Tgu-Mir-26-P4  Tni-Mir-26-P4  Xtr-Mir-26-P4 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030726.1: 143656238-143656298 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGACAUGGGAAUAAAUGGCUGAGGCCUGGUUCAAGUAAUCCAGGAUAGGCUGUUUCCCCAAAGUACGGCCUACUCUUGAUUACUUGUUUCAGGAGGCAGCUCGUAUUACAUCAGGACUCC
Get precursor sequence
Structure
        10          20        30        40        50          
UUGACAUGGGAAUAAAU--|    AGG     UU         C  GA      GUUUCCC 
                   GGCUG   CCUGG  CAAGUAAUC AG  UAGGCU       \
                   UCGAC   GGACU  GUUCAUUAG UC  AUCCGG       C
CCUCAGGACUACAUUAUGC^    GGA     UU         U  UC      CAUGAAA 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Eg He Re St St St St
Mature sequence

Xla-Mir-26-P4a_5p
mirBase accessionMIMAT0046555
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
Get sequence
Star sequence

Xla-Mir-26-P4a_3p*
mirBase accessionMIMAT0046556
Sequence 
39- CCUACUCUUGAUUACUUGUUUC -61
Get sequence