MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-26-P2f

Family name MIR-26 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-26-P1c  Xla-Mir-26-P1d  Xla-Mir-26-P2e  Xla-Mir-26-P4a  Xla-Mir-26-P4b 
Orthologues Aca-Mir-26-P2  Bta-Mir-26-P2  Cfa-Mir-26-P2  Cja-Mir-26-P2  Cli-Mir-26-P2  Cpi-Mir-26-P2  Cpo-Mir-26-P2  Dno-Mir-26-P2  Eca-Mir-26-P2  Ete-Mir-26-P2  Gga-Mir-26-P2  Gja-Mir-26-P2  Hsa-Mir-26-P2  Laf-Mir-26-P2  Lch-Mir-26-P2  Loc-Mir-26-P2  Mdo-Mir-26-P2  Mml-Mir-26-P2  Mmr-Mir-26-P2  Mmu-Mir-26-P2  Mun-Mir-26-P2  Neu-Mir-26-P2  Oan-Mir-26-P2  Ocu-Mir-26-P2  Pab-Mir-26-P2  Pbv-Mir-26-P2  Pma-Mir-26-o2  Rno-Mir-26-P2  Sha-Mir-26-P2  Spt-Mir-26-P2  Sto-Mir-26-P2  Tgu-Mir-26-P2 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030741.1: 48190685-48190745 [-] UCSC Ensembl
Seed UCAAGUA
Precursor
(pre-Mir +30nt flank)		 
AGCAACAAGGAAUCCUGACUGGGCACUAGAUUCAAGUAAUCCAGGAUAGGCUGUAAUGUCUCCUGUCAGCCUAUUCUCGAUUACUUGGGUCCAGAGCCAAUCACUUUCAGCGAAUGAUGCA
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Structure
        10        20          30        40        50          
AGCAACAAGGAAUCCUGACUG--|  A  A             C          GUAAUGU 
                       GGC CU GAUUCAAGUAAUC AGGAUAGGCU       \
                       CCG GA CUGGGUUCAUUAG UCUUAUCCGA       C
ACGUAGUAAGCGACUUUCACUAA^  A  C             C          CUGUCCU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Eg Em Em He Ki Re St St
Mature sequence

Xla-Mir-26-P2f_5p
mirBase accessionNone
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Xla-Mir-26-P2f_3p*
mirBase accessionNone
Sequence 
39- CCUAUUCUCGAUUACUUGGGUC -61
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