MirGeneDB 2.1
MirGeneDB ID

Ami-Mir-26-P4

Family name MIR-26 (all species)
Seed UCAAGUA
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-26-2
Paralogues Ami-Mir-26-P1 
Orthologues Aca-Mir-26-P4  Bta-Mir-26-P4  Cfa-Mir-26-P4  Cpi-Mir-26-P4  Cpo-Mir-26-P4  Dno-Mir-26-P4  Dre-Mir-26-P4  Ete-Mir-26-P4  Gga-Mir-26-P4  Gja-Mir-26-P4  Gmo-Mir-26-P4  Hsa-Mir-26-P4  Lch-Mir-26-P4  Loc-Mir-26-P4  Mal-Mir-26-P4  Mdo-Mir-26-P4  Mml-Mir-26-P4  Mmu-Mir-26-P4  Mun-Mir-26-P4  Oan-Mir-26-P4  Ocu-Mir-26-P4  Pbv-Mir-26-P4  Pma-Mir-26-o4  Rno-Mir-26-P4  Sha-Mir-26-P4  Spt-Mir-26-P4  Sto-Mir-26-P4  Tgu-Mir-26-P4  Tni-Mir-26-P4  Xla-Mir-26-P4a  Xla-Mir-26-P4b  Xtr-Mir-26-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017714443.1: 114276-114335 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CGGAGCAGGACCCAUGGGGUCACGGCCCGGUUCAAGUAAUCCAGGAUAGGCUGGUGCCAGGCCCGUGGCCUAUUCUCGAUUACUUGUCUCGGGACGUGGCUGCUGGCACGGCGACGCUGG
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Structure
        10          20        30        40        50         
CGGAGCAGGACCCAUGG--|      G     UU         C          GGUGCC 
                   GGUCACG CCCGG  CAAGUAAUC AGGAUAGGCU      A
                   UCGGUGC GGGCU  GUUCAUUAG UCUUAUCCGG      G
GGUCGCAGCGGCACGGUCG^      A     CU         C          UGCCCG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Ami-Mir-26-P4_5p
mirBase accessionMIMAT0038064
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
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Star sequence

Ami-Mir-26-P4_3p*
mirBase accessionMIMAT0038066
Sequence 
38- CCUAUUCUCGAUUACUUGUCUC -60
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