| MirGeneDB ID | Lch-Mir-26-P4 |
|---|---|
| Family name | MIR-26 (all species) |
| Seed | UCAAGUA |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | Lch-Mir-26-P1 Lch-Mir-26-P2 |
| Orthologues | Aca-Mir-26-P4 Ami-Mir-26-P4 Bta-Mir-26-P4 Cfa-Mir-26-P4 Cpi-Mir-26-P4 Cpo-Mir-26-P4 Dno-Mir-26-P4 Dre-Mir-26-P4 Ete-Mir-26-P4 Gga-Mir-26-P4 Gja-Mir-26-P4 Gmo-Mir-26-P4 Hsa-Mir-26-P4 Loc-Mir-26-P4 Mal-Mir-26-P4 Mdo-Mir-26-P4 Mml-Mir-26-P4 Mmu-Mir-26-P4 Mun-Mir-26-P4 Oan-Mir-26-P4 Ocu-Mir-26-P4 Pbv-Mir-26-P4 Pma-Mir-26-o4 Rno-Mir-26-P4 Sha-Mir-26-P4 Spt-Mir-26-P4 Sto-Mir-26-P4 Tgu-Mir-26-P4 Tni-Mir-26-P4 Xla-Mir-26-P4a Xla-Mir-26-P4b Xtr-Mir-26-P4 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH126659.1: 411216-411276 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | UUUUCCUUCUCCUCAGUGGCUCCGGCCUGGUUCAAGUAAUCCAGGAUAGGCUGUUUCCACCCAGUGAGGCCUAUUCUCGAUUACUUGUUUCAGGAGGAAGCCUGUAGCAACGAGAGGACUUGet precursor sequence |
| Structure | 10 20 30 40 50 UUUUCCUUCUCCUCAGU-- -| GG UU C GUUUCCA GGC UCC CCUGG CAAGUAAUC AGGAUAGGCU \ CCG AGG GGACU GUUCAUUAG UCUUAUCCGG C UUCAGGAGAGCAACGAUGU A^ A- UU C AGUGACC . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Lch-Mir-26-P4_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UUCAAGUAAUCCAGGAUAGGCU -22
Get sequence
|
| Star sequence | Lch-Mir-26-P4_3p* (predicted) |
| mirBase accession | None |
| Sequence |
39- CCUAUUCUCGAUUACUUGUUUC -61
Get sequence
|
