Mir-26-P4

MirGeneDB ID

Gmo-Mir-26-P4

Family name

MIR-26 (all species)

Species

Cod (Gadus morhua)

MiRBase ID

gmo-mir-26a-3

Paralogues

Gmo-Mir-26-P1a Gmo-Mir-26-P1b Gmo-Mir-26-P2a Gmo-Mir-26-P2b

Orthologues

Aca-Mir-26-P4 Ami-Mir-26-P4 Bta-Mir-26-P4 Cfa-Mir-26-P4 Cja-Mir-26-P4 Cpi-Mir-26-P4 Cpo-Mir-26-P4 Dno-Mir-26-P4 Dre-Mir-26-P4 Eca-Mir-26-P4 Ete-Mir-26-P4 Gga-Mir-26-P4 Gja-Mir-26-P4 Hsa-Mir-26-P4 Laf-Mir-26-P4 Lch-Mir-26-P4 Loc-Mir-26-P4 Mal-Mir-26-P4 Mdo-Mir-26-P4 Mml-Mir-26-P4 Mmr-Mir-26-P4 Mmu-Mir-26-P4 Mun-Mir-26-P4 Neu-Mir-26-P4 Oan-Mir-26-P4 Ocu-Mir-26-P4 Pab-Mir-26-P4 Pbv-Mir-26-P4 Pma-Mir-26-o4 Rno-Mir-26-P4 Sha-Mir-26-P4 Spt-Mir-26-P4 Sto-Mir-26-P4 Tgu-Mir-26-P4 Tni-Mir-26-P4 Xla-Mir-26-P4a Xla-Mir-26-P4b Xtr-Mir-26-P4

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(Gadus_morhua.gadMor1.dna.toplevel)

GeneScaffold_2026: 277330-277390 [-] UCSC Ensembl

Seed

UCAAGUA

Precursor
(pre-Mir +30nt flank)

CGGACUCAUCUUUUUUUGGCCAUGGCUUGGUUCAAGUAAUCCAGGAUAGGCUGGUUCACAACCGCACGGCCUAUUUUUGAUUACUUGUUUCAGGAAAUGGUACCUGGCAGCGGCGGAGCUG

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Structure

        10          20        30        40        50          
CGGACUCAUCUUUUUUUG--|    GG     UU         C          GGUUCAC 
                    GCCAU  CUUGG  CAAGUAAUC AGGAUAGGCU       \
                    UGGUA  GGACU  GUUCAUUAG UUUUAUCCGG       A
GUCGAGGCGGCGACGGUCCA^    AA     UU         U          CACGCCA 
 .       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Br	Gi	He	In	Li	Sk	Sp	Wh

Mature sequence

Gmo-Mir-26-P4_5p

mirBase accession

MIMAT0044164

Sequence

0- UUCAAGUAAUCCAGGAUAGGCU -22

Get sequence

Star sequence

Gmo-Mir-26-P4_3p*

mirBase accession

None

Sequence

39- CCUAUUUUUGAUUACUUGUUUC -61

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