Mir-430-P41

MirGeneDB ID

Hsa-Mir-430-P41

Family name

MIR-430 (all species)

Seed

AAAUGGU

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-522

Paralogues

Hsa-Mir-430-P1 Hsa-Mir-430-P2 Hsa-Mir-430-P3 Hsa-Mir-430-P4 Hsa-Mir-430-P5 Hsa-Mir-430-P6 Hsa-Mir-430-P7 Hsa-Mir-430-P8a Hsa-Mir-430-P8b Hsa-Mir-430-P9a Hsa-Mir-430-P9b Hsa-Mir-430-P10 Hsa-Mir-430-P11 Hsa-Mir-430-P12 Hsa-Mir-430-P13 Hsa-Mir-430-P14 Hsa-Mir-430-P15 Hsa-Mir-430-P16 Hsa-Mir-430-P17 Hsa-Mir-430-P18 Hsa-Mir-430-P19 Hsa-Mir-430-P20 Hsa-Mir-430-P21 Hsa-Mir-430-P22 Hsa-Mir-430-P23 Hsa-Mir-430-P24 Hsa-Mir-430-P25 Hsa-Mir-430-P26 Hsa-Mir-430-P27a Hsa-Mir-430-P27b Hsa-Mir-430-P29a Hsa-Mir-430-P29b Hsa-Mir-430-P31a Hsa-Mir-430-P31b Hsa-Mir-430-P33 Hsa-Mir-430-P34 Hsa-Mir-430-P35a Hsa-Mir-430-P35b Hsa-Mir-430-P35c Hsa-Mir-430-P38 Hsa-Mir-430-P39 Hsa-Mir-430-P42 Hsa-Mir-430-P43 Hsa-Mir-430-P44 Hsa-Mir-430-P45 Hsa-Mir-430-P46 Hsa-Mir-430-P47 Hsa-Mir-430-P48 Hsa-Mir-430-P49 Hsa-Mir-430-P50

Orthologues

Gja-Mir-430-o41 Mml-Mir-430-P41

Node of Origin (locus)

Catarrhini

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr19: 53751226-53751285 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P41)

Mir-430-P22 chr19: 53701228-53701288 [+] UCSC Ensembl
Mir-430-P10 chr19: 53702750-53702808 [+] UCSC Ensembl
Mir-430-P45 chr19: 53706266-53706324 [+] UCSC Ensembl
Mir-430-P23 chr19: 53707468-53707527 [+] UCSC Ensembl
Mir-430-P11 chr19: 53708759-53708817 [+] UCSC Ensembl
Mir-430-P43 chr19: 53711017-53711075 [+] UCSC Ensembl
Mir-430-P35a chr19: 53712282-53712342 [+] UCSC Ensembl
Mir-430-P19 chr19: 53713361-53713422 [+] UCSC Ensembl
Mir-430-P29b chr19: 53716608-53716668 [+] UCSC Ensembl
Mir-430-P24 chr19: 53720111-53720170 [+] UCSC Ensembl
Mir-430-P35b chr19: 53721081-53721139 [+] UCSC Ensembl
Mir-430-P27b chr19: 53722182-53722241 [+] UCSC Ensembl
Mir-430-P34 chr19: 53725457-53725514 [+] UCSC Ensembl
Mir-430-P46 chr19: 53726928-53726982 [+] UCSC Ensembl
Mir-430-P13 chr19: 53729853-53729911 [+] UCSC Ensembl
Mir-430-P38 chr19: 53731019-53731078 [+] UCSC Ensembl
Mir-430-P12 chr19: 53734892-53734950 [+] UCSC Ensembl
Mir-430-P33 chr19: 53736860-53736922 [+] UCSC Ensembl
Mir-430-P39 chr19: 53739348-53739407 [+] UCSC Ensembl
Mir-430-P35c chr19: 53741332-53741390 [+] UCSC Ensembl
Mir-430-P27a chr19: 53742528-53742587 [+] UCSC Ensembl
Mir-430-P29a chr19: 53748650-53748710 [+] UCSC Ensembl
Mir-430-P41 chr19: 53751226-53751285 [+] UCSC Ensembl
Mir-430-P15 chr19: 53752410-53752470 [+] UCSC Ensembl
Mir-430-P48 chr19: 53754031-53754089 [+] UCSC Ensembl
Mir-430-P31a chr19: 53756756-53756818 [+] UCSC Ensembl
Mir-430-P50 chr19: 53758246-53758304 [+] UCSC Ensembl
Mir-430-P31b chr19: 53761148-53761210 [+] UCSC Ensembl
Mir-430-P16 chr19: 53762358-53762418 [+] UCSC Ensembl
Mir-430-P5 chr19: 53787680-53787738 [+] UCSC Ensembl
Mir-430-P6 chr19: 53787895-53787953 [+] UCSC Ensembl
Mir-430-P7 chr19: 53788710-53788770 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GCUGGAGCAAGAAGAUCUCAGGCUGUGUCCCUCUAGAGGGAAGCGCUUUCUGUUGUCUGAAAGAAAAGAAAAUGGUUCCCUUUAGAGUGUUACGCUUUGAGAAAAGCAUCGCUGAUCUUG

Get precursor sequence

Structure

        10            20        30        40        50         
GCUGGAGCAAGAAGAUC---  -|   U   UCC            G  C     GUUGUCU 
                    UC AGGC GUG   CUCUAGAGGGAA CG UUUCU       \
                    AG UUCG CAU   GAGAUUUCCCUU GU AAAGA       G
GUUCUAGUCGCUACGAAAAG  U^   -   UGU            G  A     AAAGAAA 
.       110       100         90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Star sequence

Hsa-Mir-430-P41_5p*

mirBase accession

MIMAT0005451

Sequence

0- CUCUAGAGGGAAGCGCUUUCUG -22

Get sequence

Proposed targets

microrna.org: MIMAT0005451
TargetScanVert: hsa-miR-522-5p
TargetMiner: hsa-miR-522-5p
miRDB: MIMAT0005451

Mature sequence

Hsa-Mir-430-P41_3p

mirBase accession

MIMAT0002868

Sequence

38- AAAAUGGUUCCCUUUAGAGUGU -60

Get sequence

Proposed targets

microrna.org: MIMAT0002868
TargetScanVert: hsa-miR-522-3p
TargetMiner: hsa-miR-522-3p
miRDB: MIMAT0002868