MirGeneDB 2.1
MirGeneDB ID

Gja-Mir-430-o41

Family name MIR-430 (all species)
Seed AAGUGCU
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-430-o40  Gja-Mir-430-P3 
Orthologues Hsa-Mir-430-P41  Mml-Mir-430-P41 
Node of Origin (locus) G. japonicus
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015175473.1: 128972-129034 [+]
Precursor
(pre-Mir +30nt flank)
CUCCCACCCAGACGAGGCCUCGGGAAGCCCACGCAGACAGUGGCACUUGCUUGUGAUCAUCCAAUUCAAUUAAGUGCUAUAUUGUUUGUGUGUGUUUUCGGGCCUGGCGCAGCAGCUGUCUCC
Get precursor sequence
Structure
        10          20        30          40        50          
CUCCCACCCAGACGAGGCC--  G      C          --|         CUUGUGAUCA 
                     UC GGAAGC CACGCAGACA  GUGGCACUUG          \
                     GG CUUUUG GUGUGUUUGU  UAUCGUGAAU          U
CCUCUGUCGACGACGCGGUCC  G      U          UA^         UAACUUAACC 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Gja-Mir-430-o41_5p*
mirBase accessionNone
Sequence 
0- ACGCAGACAGUGGCACUUGCU -21
Get sequence
Mature sequence

Gja-Mir-430-o41_3p
mirBase accessionNone
Sequence 
40- UAAGUGCUAUAUUGUUUGUGUGU -63
Get sequence