MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-499-P1

Family name MIR-499 (all species)
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-499
Paralogues Dre-Mir-499-P2 
Orthologues Aca-Mir-499  Ami-Mir-499  Bta-Mir-499  Cfa-Mir-499  Cja-Mir-499  Cli-Mir-499  Cpi-Mir-499  Cpo-Mir-499  Dno-Mir-499  Ebu-Mir-499  Eca-Mir-499  Ete-Mir-499  Gga-Mir-499  Gja-Mir-499  Gmo-Mir-499-P1  Hsa-Mir-499  Laf-Mir-499  Lch-Mir-499  Loc-Mir-499  Mal-Mir-499-P1  Mdo-Mir-499  Mml-Mir-499  Mmr-Mir-499  Mmu-Mir-499  Mun-Mir-499  Oan-Mir-499  Ocu-Mir-499  Pab-Mir-499  Pbv-Mir-499  Pma-Mir-499  Rno-Mir-499  Sha-Mir-499  Spt-Mir-499  Sto-Mir-499  Tgu-Mir-499  Tni-Mir-499-P1  Xtr-Mir-499 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr11: 25205169-25205227 [-] UCSC Ensembl
Seed UAAGACU
Precursor
(pre-Mir +30nt flank)		 
GAAAACUGUCCAAUACUGAGAGGGAGGCAGUUAAGACUUGCAGUGAUGUUUAGAGAAAUGUCACAUGAACAUCACUUUAAGUCUGUGCUGGCUCCUGUUCUGAGUCUACAAAGUGCUUC
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Structure
        10          20        30        40        50         
GAAAACUGUCCAAUACU--|  A     G    UA       C           GAGAAA 
                   GAG GGGAG CAGU  AGACUUG AGUGAUGUUUA      \
                   CUU UCCUC GUCG  UCUGAAU UCACUACAAGU      U
CUUCGUGAAACAUCUGAGU^  G     G    UG       U           ACACUG 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-499-P1_5p
mirBase accessionMIMAT0003749
Sequence 
0- UUAAGACUUGCAGUGAUGUUUA -22
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Proposed targets TargetScanFish: dre-miR-499
Star sequence

Dre-Mir-499-P1_3p*
mirBase accessionMIMAT0032009
Sequence 
37- AACAUCACUUUAAGUCUGUGCU -59
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