MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-499-P2

Family name MIR-499 (all species)
Species Zebrafish (Danio rerio)
MiRBase ID
Paralogues Dre-Mir-499-P1 
Orthologues Aca-Mir-499  Ami-Mir-499  Bta-Mir-499  Cfa-Mir-499  Cja-Mir-499  Cli-Mir-499  Cpi-Mir-499  Cpo-Mir-499  Dno-Mir-499  Ebu-Mir-499  Eca-Mir-499  Ete-Mir-499  Gga-Mir-499  Gja-Mir-499  Hsa-Mir-499  Laf-Mir-499  Lch-Mir-499  Loc-Mir-499  Mdo-Mir-499  Mml-Mir-499  Mmr-Mir-499  Mmu-Mir-499  Mun-Mir-499  Oan-Mir-499  Ocu-Mir-499  Pab-Mir-499  Pbv-Mir-499  Pma-Mir-499  Rno-Mir-499  Sha-Mir-499  Spt-Mir-499  Sto-Mir-499  Tgu-Mir-499  Xtr-Mir-499 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr23: 18731335-18731394 [+] UCSC Ensembl
Seed UAAGACU
Precursor
(pre-Mir +30nt flank)		 
UUGAGAGAGAAUGAGAAGAGAGUGAGCCAGUUAAGACUUGCAGUGAUGUUUAGGUAAUCUGACCCAUGAACAUCACUUUAAGUCUGUGCUGGCUCAGCUUUCACCAUCUACUGAUGCAGA
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Structure
        10         20         30        40        50         
UUGAGAGAGAAUGAGAA-     -|        UA       C           GGUAAU 
                  GAGAG UGAGCCAGU  AGACUUG AGUGAUGUUUA      C
                  CUUUC ACUCGGUCG  UCUGAAU UCACUACAAGU      U
AGACGUAGUCAUCUACCA     G^        UG       U           ACCCAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-499-P2_5p
mirBase accessionNone
Sequence 
0- UUAAGACUUGCAGUGAUGUUUA -22
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Star sequence

Dre-Mir-499-P2_3p*
mirBase accessionNone
Sequence 
38- AACAUCACUUUAAGUCUGUGCU -60
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