MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-499

Family name MIR-499 (all species)
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-499
Paralogues
Orthologues Aca-Mir-499  Ami-Mir-499  Bta-Mir-499  Cfa-Mir-499  Cja-Mir-499  Cli-Mir-499  Cpo-Mir-499  Dno-Mir-499  Dre-Mir-499-P1  Dre-Mir-499-P2  Ebu-Mir-499  Eca-Mir-499  Ete-Mir-499  Gga-Mir-499  Gja-Mir-499  Gmo-Mir-499-P1  Hsa-Mir-499  Laf-Mir-499  Lch-Mir-499  Loc-Mir-499  Mal-Mir-499-P1  Mdo-Mir-499  Mml-Mir-499  Mmr-Mir-499  Mmu-Mir-499  Mun-Mir-499  Oan-Mir-499  Ocu-Mir-499  Pab-Mir-499  Pbv-Mir-499  Pma-Mir-499  Rno-Mir-499  Sha-Mir-499  Spt-Mir-499  Sto-Mir-499  Tgu-Mir-499  Tni-Mir-499-P1  Xla-Mir-499-P3  Xla-Mir-499-P4  Xtr-Mir-499 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(chrPic1)		 JH584656: 11561841-11561900 [-] UCSC Ensembl
Seed UAAGACU
Precursor
(pre-Mir +30nt flank)		 
GCAGCAUCUCCGCCUUUGGGAGAGCGGCAGUUAAGACUUGCAGUGAUGUUUAGAUAAUGUAUUACAUGAACAUCACUUUAAGUCUGUGCUACCUCUCUCCUCACUCUGGACUGCGGGAAG
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Structure
        10          20        30        40        50         
GCAGCAUCUCCGCCUUU--|      C  C   UA       C           GAUAAU 
                   GGGAGAG GG AGU  AGACUUG AGUGAUGUUUA      G
                   UCCUCUC CC UCG  UCUGAAU UCACUACAAGU      U
GAAGGGCGUCAGGUCUCAC^      U  A   UG       U           ACAUUA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Te Te Te To
Mature sequence

Cpi-Mir-499_5p
mirBase accessionMIMAT0037901
Sequence 
0- UUAAGACUUGCAGUGAUGUUUA -22
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Star sequence

Cpi-Mir-499_3p*
mirBase accessionMIMAT0037902
Sequence 
38- AACAUCACUUUAAGUCUGUGCU -60
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