| MirGeneDB ID | Lch-Mir-499 |
|---|---|
| Family name | MIR-499 (all species) |
| Seed | UAAGACU |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-499 Ami-Mir-499 Bta-Mir-499 Cfa-Mir-499 Cli-Mir-499 Cpi-Mir-499 Cpo-Mir-499 Dno-Mir-499 Dre-Mir-499-P1 Dre-Mir-499-P2 Ebu-Mir-499 Ete-Mir-499 Gga-Mir-499 Gja-Mir-499 Gmo-Mir-499-P1 Hsa-Mir-499 Loc-Mir-499 Mal-Mir-499-P1 Mdo-Mir-499 Mml-Mir-499 Mmu-Mir-499 Mun-Mir-499 Oan-Mir-499 Ocu-Mir-499 Pbv-Mir-499 Pma-Mir-499 Rno-Mir-499 Sha-Mir-499 Spt-Mir-499 Sto-Mir-499 Tgu-Mir-499 Tni-Mir-499-P1 Xla-Mir-499-P3 Xla-Mir-499-P4 Xtr-Mir-499 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH126566.1: 2848716-2848775 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | UGAGUGACAGAGAGAGAGAGAGAGAGGCAGUUAAGACUUGCAGUGAUGUUUAGAAAAUUCAAAUCAUGAACAUCACUUUAAGUCUGUGCUACUUCUUUUCUCACUCUAGACUAAAGGAAAGet precursor sequence |
| Structure | 10 20 30 40 50 UGAGUGACAGAGAGAGA- -| C UA C GAAAAU GAG AGAGAGG AGU AGACUUG AGUGAUGUUUA U CUC UUUCUUC UCG UCUGAAU UCACUACAAGU C AAAGGAAAUCAGAUCUCA U^ A UG U ACUAAA . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Lch-Mir-499_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UUAAGACUUGCAGUGAUGUUUA -22
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|
| Star sequence | Lch-Mir-499_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- AACAUCACUUUAAGUCUGUGCU -60
Get sequence
|
