MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-499

Family name MIR-499 (all species)
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-499
Paralogues
Orthologues Aca-Mir-499  Ami-Mir-499  Bta-Mir-499  Cfa-Mir-499  Cja-Mir-499  Cli-Mir-499  Cpi-Mir-499  Cpo-Mir-499  Dno-Mir-499  Dre-Mir-499-P1  Dre-Mir-499-P2  Ebu-Mir-499  Eca-Mir-499  Ete-Mir-499  Gga-Mir-499  Gja-Mir-499  Gmo-Mir-499-P1  Hsa-Mir-499  Laf-Mir-499  Lch-Mir-499  Loc-Mir-499  Mal-Mir-499-P1  Mdo-Mir-499  Mmr-Mir-499  Mmu-Mir-499  Mun-Mir-499  Oan-Mir-499  Ocu-Mir-499  Pab-Mir-499  Pbv-Mir-499  Pma-Mir-499  Rno-Mir-499  Sha-Mir-499  Spt-Mir-499  Sto-Mir-499  Tgu-Mir-499  Tni-Mir-499-P1  Xla-Mir-499-P3  Xla-Mir-499-P4  Xtr-Mir-499 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014345.1: 70196832-70196890 [+] UCSC Ensembl
Seed UAAGACU
Precursor
(pre-Mir +30nt flank)
CCUGUCCCCCGUGUCUUGGGCGGGCAGCUGUUAAGACUUGCAGUGAUGUUUAACUCCUCUCCACGUGAACAUCACAGCAAGUCUGUGCUGCUUCCCGUCCCUACGCUGCCUGGGCAGGG
Get precursor sequence
Structure
        10          20        30        40        50         
CCUGUCCCCCGUGUCUU--|      C   U  UA        A          ACUCCU 
                   GGGCGGG AGC GU  AGACUUGC GUGAUGUUUA      \
                   CCUGCCC UCG CG  UCUGAACG CACUACAAGU      C
GGGACGGGUCCGUCGCAUC^      U   U  UG        A          GCACCU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
CommentThere are Dicer cuts +1 and +2 on the 3p arm.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-499_5p

mirBase accessionMIMAT0006361
Sequence
0- UUAAGACUUGCAGUGAUGUUUA -22
Get sequence
Proposed targets TargetScanVert: mml-miR-499-5p
Star sequence

Mml-Mir-499_3p*

mirBase accessionMIMAT0006362
Sequence
37- AACAUCACAGCAAGUCUGUGCU -59
Get sequence
Proposed targets TargetScanVert: mml-miR-499-3p