MirGeneDB 3.0

38 microRNA genes of family MIR-242
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Ava-Mir-242-P10 None MIR-242 UGCGUAG None None CP075492.1 7934575 7934649 + A. vaga Nephrozoa Unknown 1 1
Ava-Mir-242-P9 None MIR-242 UGCGUAG None None CP075497.1 8451995 8452069 - A. vaga Nephrozoa No 1
Nag-Mir-242-P8 None MIR-242 UGCGUAG None None k149_2538 1655 1711 - N.agilis Nephrozoa No
Nag-Mir-242-P7 None MIR-242 UGCGUAG None None k149_10908 19517 19574 + N.agilis Nephrozoa No
Pve-Mir-242-P6 None MIR-242 UGCGUAG None None Pve_Chr9 281369414 281369471 + Dentaliidae Nephrozoa Unknown
Pve-Mir-242-P5 None MIR-242 UGCGUAG None None Pve_Chr9 281370893 281370948 + Dentaliidae Nephrozoa Unknown 1
Pdu-Mir-242-P4d None MIR-242 UGCGUAG None None JAPTHN010000007.1 29836784 29836846 + P. dumerilii Nephrozoa No 1
Pdu-Mir-242-P4c None MIR-242 UGCGUAG None None JAPTHN010000007.1 29827092 29827154 + P. dumerilii Nephrozoa No 1
Pdu-Mir-242-P4b None MIR-242 UGCGUAG None None JAPTHN010000007.1 29826777 29826839 + P. dumerilii Nephrozoa No 1
Pdu-Mir-242-P4a None MIR-242 UGCGUAG None None JAPTHN010000007.1 29826411 29826473 + P. dumerilii Nephrozoa No
Hru-Mir-242-P3b None MIR-242 UGCGUAG None None JALGQA010000016.1 16931077 16931132 - H. rufescens Nephrozoa Unknown 1 1 1
Hru-Mir-242-P3a None MIR-242 UGCGUAG None None JALGQA010000016.1 16932597 16932652 - H. rufescens Nephrozoa Unknown 1 1 1
Lgi-Mir-242-P2 lgi-mir-242a MIR-242 UGCGUAG MIMAT0009590 None LOTGIsca_16 1142666 1142720 - L. gigantea Nephrozoa Unknown 1
Lgi-Mir-242-P1 lgi-mir-242b MIR-242 UGCGUAG MIMAT0009681 None LOTGIsca_16 1142985 1143041 - L. gigantea Nephrozoa Unknown
Bla-Mir-242 V None MIR-242 GCGUAGG None None Sc0000023 499951 500006 - Nephrozoa Nephrozoa 2 No
War-Mir-242 None MIR-242 UGCGUAG None None WNLI01179040.1 349 410 + Nephrozoa Nephrozoa Unknown 1 1
Spu-Mir-242 spu-mir-242 MIR-242 UGCGUAG MIMAT0009647 None AAGJ06000857.1 1093867 1093927 - Nephrozoa Nephrozoa No
Snu-Mir-242 None MIR-242 UGCGUAG None None CM049306.1 6216699 6216755 - Nephrozoa Nephrozoa Unknown 1
Sko-Mir-242 sko-mir-242 MIR-242 GCGUAGG MIMAT0009637 None NW_003141865.1 15153 15212 + Nephrozoa Nephrozoa Unknown 1
Rph-Mir-242 None MIR-242 UGCGUAG None None CM018527.1 22888371 22888428 - Nephrozoa Nephrozoa Unknown
Pmi-Mir-242 pmi-mir-242 MIR-242 UGCGUAG MIMAT0032169 None JH788435.1 1558 1620 + Nephrozoa Nephrozoa No 1
Pfl-Mir-242 None MIR-242 GCGUAGG None None LD346879.1 366091 366150 + Nephrozoa Nephrozoa Unknown 1
Pca-Mir-242 None MIR-242 UGCGUAG None None AXZU02061064.1 392 448 + Nephrozoa Nephrozoa Unknown 1
Pau-Mir-242 None MIR-242 UGCGUAG None None NMRA01000005.1 1372726 1372781 + Nephrozoa Nephrozoa Unknown 1
Ofu-Mir-242 None MIR-242 UGCGUAG None None CAIIXF020000005.1 7432639 7432697 + Nephrozoa Nephrozoa Unknown
Npo-Mir-242 None MIR-242 UGCGUAG None None JACATO010000680.1 783878 783934 - Nephrozoa Nephrozoa Unknown 1
Mom-Mir-242 None MIR-242 UGCGUAG None None JARFOD010132518.1 5112 5170 + Nephrozoa Nephrozoa Unknown
Mgi-Mir-242 None MIR-242 UGCGUAG None None scaffold507 280160 280218 + Nephrozoa Nephrozoa No 1
Lhy-Mir-242 None MIR-242 UGCGUAG None None scaffold173914_17.5 861 918 - Nephrozoa Nephrozoa Unknown 1
Lan-Mir-242 None MIR-242 UGCGUAG None None LFEI01001408 48107 48163 + Nephrozoa Nephrozoa Unknown 1
Eba-Mir-242 None MIR-242 UGCGUAG None None WURV02166278.1 1095 1153 + Nephrozoa Nephrozoa Unknown 1
Cte-Mir-242 cte-mir-242 MIR-242 UGCGUAG MIMAT0009680 None CAPTEscaffold_453 18518 18578 - Nephrozoa Nephrozoa No 1
Cel-Mir-242 cel-mir-242 MIR-242 UGCGUAG MIMAT0000298 None chrIV 4274262 4274320 + Nephrozoa Nephrozoa No
Cbr-Mir-242 cbr-mir-242 MIR-242 UGCGUAG MIMAT0004296 None II 15031468 15031526 - Nephrozoa Nephrozoa No
Bpl-Mir-242 None MIR-242 UGCGUAG None None QEOQ01000508.1 5043559 5043655 - Nephrozoa Nephrozoa No 1 1
Bko-Mir-242 None MIR-242 UGCGUAG None None PJRA01000172.1 202468 202564 - Nephrozoa Nephrozoa No 1 1
Bfl-Mir-242 bfl-mir-242 MIR-242 GCGUAGG MIMAT0009497 None NC_049983.1 386229 386284 - Nephrozoa Nephrozoa Unknown
Agr-Mir-242 None MIR-242 UGCGUAG None None JABBOT010000004.1 12479370 12479428 + Nephrozoa Nephrozoa Unknown

(red - mature/co-mature, blue - star)

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all