MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-242-P5

Family name MIR-242 (all species)
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues Pve-Mir-242-P6 
Orthologues Agr-Mir-242  Bfl-Mir-242  Bko-Mir-242  Bpl-Mir-242  Cbr-Mir-242  Cel-Mir-242  Cte-Mir-242  Eba-Mir-242  Lan-Mir-242  Lhy-Mir-242  Mgi-Mir-242  Mom-Mir-242  Npo-Mir-242  Ofu-Mir-242  Pau-Mir-242  Pca-Mir-242  Pfl-Mir-242  Pmi-Mir-242  Rph-Mir-242  Sko-Mir-242  Snu-Mir-242  Spu-Mir-242  War-Mir-242 
Node of Origin (locus) Dentaliidae
Node of Origin (family) Nephrozoa
Genome context
(Pve_genome_chr_only)		 Pve_Chr9: 281370893-281370948 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-242-P5)		 Mir-242-P6 Pve_Chr9: 281369414-281369471 [+] Ensembl
Mir-242-P5 Pve_Chr9: 281370893-281370948 [+] Ensembl
Seed UGCGUAG
Precursor
(pre-Mir +30nt flank)		 
CAUAGGCCAAAACGGACAUAUUUAAUUGUGUUGCGUAGGUAUUAUGCACAGGAGUUUCUUGGUCUGUGUCUUUUACCUAUGCAGCACGAUUGAAUAUACAAUCAACUGAUUCAACA
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Structure
        10          20        30        40        50       
CAUAGGCCAAAACGGAC--|                       UUAU       AGUU 
                   AUAUUUAAUUGUGUUGCGUAGGUA    GCACAGG    U
                   UAUAAGUUAGCACGACGUAUCCAU    UGUGUCU    C
ACAACUUAGUCAACUAACA^                       UUUC       GGUU 
    110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Pve-Mir-242-P5_5p (predicted)
mirBase accessionNone
Sequence 
0- UUGCGUAGGUAUUAUGCACAGG -22
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Star sequence

Pve-Mir-242-P5_3p* (predicted)
mirBase accessionNone
Sequence 
34- UGUGUCUUUUACCUAUGCAGCA -56
Get sequence