MirGeneDB 3.0
80 microRNA genes with seed UUUUUGC
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pma-Mir-129-o1 pma-mir-129a MIR-129 UUUUUGC MIMAT0019450 MIMAT0019451 NC_046075.1 14326346 14326407 - P. marinus Chordata No 1 1
Pma-Mir-129-o2 None MIR-129 UUUUUGC None None NW_022639030.1 84343 84414 - P. marinus Chordata Unknown 1 1
Ami-Mir-129-P1 ami-mir-129b MIR-129 UUUUUGC MIMAT0038138 MIMAT0038139 NW_017713697.1 10867520 10867584 - Gnathostomata Chordata No 1 1 1
Bta-Mir-129-P1 bta-mir-129-2 MIR-129 UUUUUGC MIMAT0009221 MIMAT0009222 NC_037342.1 73674115 73674178 + Gnathostomata Chordata No 1 1 1
Cfa-Mir-129-P1 cfa-mir-129-2 MIR-129 UUUUUGC MIMAT0006623 None chr18 26154533 26154596 - Gnathostomata Chordata No 1 1 1
Cja-Mir-129-P1 None MIR-129 UUUUUGC None None CM021925.1 105364478 105364540 + Gnathostomata Chordata No 1 1 1
Cpi-Mir-129-P1 cpi-mir-129-2 MIR-129 UUUUUGC MIMAT0037738 MIMAT0037740 JH584513 1057330 1057394 - Gnathostomata Chordata No 1 1 1
Cpo-Mir-129-P1 cpo-mir-129-2 MIR-129 UUUUUGC MIMAT0046977 MIMAT0046979 scaffold_72 3626366 3626428 + Gnathostomata Chordata No 1 1 1
Dno-Mir-129-P1 dno-mir-129-2 MIR-129 UUUUUGC MIMAT0047624 MIMAT0047626 JH569711 1257306 1257369 - Gnathostomata Chordata No 1 1 1
Eca-Mir-129-P1 eca-mir-129b MIR-129 UUUUUGC MIMAT0013045 MIMAT0013046 CM009159.1 8563208 8563271 + Gnathostomata Chordata No 1 1 1
Ete-Mir-129-P1 None MIR-129 UUUUUGC None None JH980324 21312941 21313004 + Gnathostomata Chordata No 1 1 1
Gga-Mir-129-P1 None MIR-129 UUUUUGC None None 5 21753622 21753686 + Gnathostomata Chordata No 1 1 1
Gja-Mir-129-P1 None MIR-129 UUUUUGC None None NW_015172598.1 463812 463876 - Gnathostomata Chordata No 1 1 1
Laf-Mir-129-P1 None MIR-129 UUUUUGC None None GL010048.1 6057388 6057451 - Gnathostomata Chordata Unknown 1 1 1
Lch-Mir-129-P1 None MIR-129 UUUUUGC None None JH126568.1 1769986 1770050 + Gnathostomata Chordata Unknown 1 1 1
Loc-Mir-129-P1 None MIR-129 UUUUUGC None None LG27 1174728 1174792 + Gnathostomata Chordata No 1 1 1
Mmr-Mir-129-P1 None MIR-129 UUUUUGC None None CM007665.1 21810172 21810235 - Gnathostomata Chordata No 1 1 1
Mmu-Mir-129-P1 mmu-mir-129-2 MIR-129 UUUUUGC MIMAT0000209 MIMAT0000544 chr2 94241376 94241439 - Gnathostomata Chordata No 1 1 1
Mun-Mir-129-P1 None MIR-129 UUUUUGC None None LR594635.1 160870794 160870858 + Gnathostomata Chordata No 1 1 1
Neu-Mir-129-P1 None MIR-129 UUUUUGC None None CM051818.1 7693352 7693416 - Gnathostomata Chordata No 1 1 1
Oan-Mir-129-P1 None MIR-129 UUUUUGC None None NC_041730.1 24847646 24847710 - Gnathostomata Chordata No 1 1 1
Ocu-Mir-129-P1 ocu-mir-129-2 MIR-129 UUUUUGC MIMAT0048214 MIMAT0048216 chr1 183233898 183233961 + Gnathostomata Chordata No 1 1 1
Pbv-Mir-129-P1 None MIR-129 UUUUUGC None None KE954163.1 237650 237714 - Gnathostomata Chordata No 1 1 1
Rno-Mir-129-P1 rno-mir-129-2 MIR-129 UUUUUGC MIMAT0000600 MIMAT0000601 chr3 83137312 83137375 - Gnathostomata Chordata No 1 1 1
Sha-Mir-129-P1 None MIR-129 UUUUUGC None None GL864892.1 59836 59900 + Gnathostomata Chordata No 1 1 1
Spt-Mir-129-P1 None MIR-129 UUUUUGC None None QEPC01006018.1 503659 503723 - Gnathostomata Chordata Unknown 1 1 1
Tgu-Mir-129-P1 tgu-mir-129 MIR-129 UUUUUGC MIMAT0014625 MIMAT0014499 5 21111818 21111882 + Gnathostomata Chordata No 1 1 1
Xtr-Mir-129-P1 xtr-mir-129-1 MIR-129 UUUUUGC MIMAT0003590 None chr4 3080989 3081053 + Gnathostomata Chordata No 1 1
Dre-Mir-129-P1a dre-mir-129-4 MIR-129 UUUUUGC MIMAT0001825 MIMAT0003158 chr25 30176484 30176548 + Clupeocephala Chordata No 1 1 1
Mal-Mir-129-P1a None MIR-129 UUUUUGC None None KV884695.1 5679857 5679921 - Clupeocephala Chordata No 1 1 1
Dre-Mir-129-P1b dre-mir-129-2 MIR-129 UUUUUGC MIMAT0001825 MIMAT0003158 chr7 50287944 50288006 - Clupeocephala Chordata No 1 1
Mal-Mir-129-P1b None MIR-129 UUUUUGC None None KV884783.1 1089616 1089678 + Clupeocephala Chordata No 1 1 1
Aca-Mir-129-P2 aca-mir-129a MIR-129 UUUUUGC MIMAT0021734 MIMAT0021735 GL343800.1 76647 76712 - Gnathostomata Chordata No 1 1
Ami-Mir-129-P2 ami-mir-129a MIR-129 UUUUUGC MIMAT0038136 MIMAT0038137 NW_017712967.1 69417 69482 - Gnathostomata Chordata Unknown 1
Bta-Mir-129-P2 bta-mir-129-1 MIR-129 UUUUUGC MIMAT0009220 None NC_037331.1 92407947 92408012 + Gnathostomata Chordata No 1 1
Cfa-Mir-129-P2 cfa-mir-129-1 MIR-129 UUUUUGC MIMAT0006623 None chr14 8165109 8165174 - Gnathostomata Chordata No 1 1
Cja-Mir-129-P2 None MIR-129 UUUUUGC None None CM021922.1 116032401 116032465 - Gnathostomata Chordata No 1 1 1
Cli-Mir-129-P2 cli-mir-129 MIR-129 UUUUUGC MIMAT0038503 MIMAT0038504 scaffold121 1772002 1772066 - Gnathostomata Chordata No 1 1 1
Cmi-Mir-129-P2 None MIR-129 UUUUUGC None None KI636866.1 1643 1708 + Gnathostomata Chordata No 1 1
Cpi-Mir-129-P2 cpi-mir-129-1 MIR-129 UUUUUGC MIMAT0037738 MIMAT0037739 JH584641 532585 532650 - Gnathostomata Chordata No 1 1
Cpo-Mir-129-P2 cpo-mir-129-1 MIR-129 UUUUUGC MIMAT0046977 MIMAT0046978 scaffold_11 48875085 48875150 + Gnathostomata Chordata No 1 1 1
Dno-Mir-129-P2 dno-mir-129-1 MIR-129 UUUUUGC MIMAT0047624 MIMAT0047625 JH569570 1703745 1703809 - Gnathostomata Chordata No 1 1
Eca-Mir-129-P2 eca-mir-129a MIR-129 UUUUUGC MIMAT0012932 MIMAT0012933 CM009151.1 83490179 83490244 + Gnathostomata Chordata No 1 1 1
Ete-Mir-129-P2 None MIR-129 UUUUUGC None None JH980321 21483528 21483593 + Gnathostomata Chordata No 1 1 1
Gja-Mir-129-P2 None MIR-129 UUUUUGC None None NW_015160237.1 400976 401041 + Gnathostomata Chordata No 1 1
Hsa-Mir-129-P2 hsa-mir-129-1 MIR-129 UUUUUGC MIMAT0000242 MIMAT0004548 chr7 128207876 128207941 + Gnathostomata Chordata No 1 1 1
Laf-Mir-129-P2 None MIR-129 UUUUUGC None None GL010032.1 97958451 97958516 + Gnathostomata Chordata Unknown 1 1 1
Lch-Mir-129-P2 None MIR-129 UUUUUGC None None JH128191.1 362868 362933 + Gnathostomata Chordata Unknown 1 1
Loc-Mir-129-P2 None MIR-129 UUUUUGC None None LG8 10137548 10137613 + Gnathostomata Chordata No 1 1 1
Mdo-Mir-129-P2 mdo-mir-129 MIR-129 UUUUUGC MIMAT0004105 MIMAT0026663 8 188064163 188064228 + Gnathostomata Chordata No 1 1 1
Mml-Mir-129-P2 mml-mir-129-1 MIR-129 UUUUUGC MIMAT0006185 MIMAT0006186 CM014338.1 154675178 154675243 + Gnathostomata Chordata No 1 1 1
Mmr-Mir-129-P2 None MIR-129 UUUUUGC None None CM007671.1 22874892 22874957 - Gnathostomata Chordata No 1 1 1
Mmu-Mir-129-P2 mmu-mir-129-1 MIR-129 UUUUUGC MIMAT0000209 MIMAT0016994 chr6 29022624 29022688 + Gnathostomata Chordata No 1 1 1
Mun-Mir-129-P2 None MIR-129 UUUUUGC None None LR594641.1 21518114 21518179 + Gnathostomata Chordata No 1 1
Neu-Mir-129-P2 None MIR-129 UUUUUGC None None CM051815.1 121821647 121821712 - Gnathostomata Chordata Unknown 1 1 1
Oan-Mir-129-P2 oan-mir-129 MIR-129 UUUUUGC MIMAT0006801 MIMAT0006802 NC_041737.1 46239912 46239977 + Gnathostomata Chordata No 1 1
Ocu-Mir-129-P2 ocu-mir-129-1 MIR-129 UUUUUGC MIMAT0048214 MIMAT0048215 chr7 16127062 16127127 - Gnathostomata Chordata No 1 1
Pab-Mir-129-P2 None MIR-129 UUUUUGC None None CM054685.2 125664090 125664155 + Gnathostomata Chordata No 1 1 1
Pbv-Mir-129-P2 pbv-mir-129a MIR-129 UUUUUGC MIMAT0038922 MIMAT0038923 KE960689.1 27996 28061 + Gnathostomata Chordata No 1 1
Rno-Mir-129-P2 rno-mir-129-1 MIR-129 UUUUUGC MIMAT0000600 MIMAT0017120 chr4 56301731 56301795 + Gnathostomata Chordata No 1 1 1
Sha-Mir-129-P2 sha-mir-129 MIR-129 UUUUUGC MIMAT0022827 None GL861653.1 2316551 2316613 + Gnathostomata Chordata No 1 1 1
Spt-Mir-129-P2 None MIR-129 UUUUUGC None None QEPC01015000.1 553675 553740 + Gnathostomata Chordata Unknown 1 1
Sto-Mir-129-P2 None MIR-129 UUUUUGC None None BFAA01002638.1 149739 149804 + Gnathostomata Chordata No 1 1
Tgu-Mir-129-P2 None MIR-129 UUUUUGC None None RRCB01000088.1 421 481 - Gnathostomata Chordata No 1 1 1
Xtr-Mir-129-P2 xtr-mir-129-2 MIR-129 UUUUUGC MIMAT0003590 None chr3 78292725 78292790 - Gnathostomata Chordata No 1 1
Dre-Mir-129-P2a dre-mir-129-3 MIR-129 UUUUUGC MIMAT0001825 MIMAT0048649 chr18 10670670 10670735 + Clupeocephala Chordata No 1 1 1
Mal-Mir-129-P2a None MIR-129 UUUUUGC None None KV884693.1 1336733 1336794 - Clupeocephala Chordata No 1 1 1
Dre-Mir-129-P2b dre-mir-129-1 MIR-129 UUUUUGC MIMAT0001825 MIMAT0031968 chr4 19047477 19047542 - Clupeocephala Chordata No 1 1 1
Mal-Mir-129-P2b None MIR-129 UUUUUGC None None KV884729.1 892123 892187 - Clupeocephala Chordata No 1 1 1
Tni-Mir-129-P2b tni-mir-129-2 MIR-129 UUUUUGC MIMAT0003036 None 19 2390426 2390490 - Clupeocephala Chordata Unknown 1 1 1
Aca-Mir-129-P4 aca-mir-129b MIR-129 UUUUUGC MIMAT0021736 MIMAT0021737 6 79191978 79192046 - Gnathostomata Chordata No 1
Ami-Mir-129-P4 None MIR-129 UUUUUGC None None NW_017709598.1 4871370 4871437 + Gnathostomata Chordata No 1
Cmi-Mir-129-P4 None MIR-129 UUUUUGC None None KI637116.1 4119 4183 + Gnathostomata Chordata No 1 1
Gja-Mir-129-P4 None MIR-129 UUUUUGC None None NW_015168079.1 600525 600593 + Gnathostomata Chordata No 1
Lch-Mir-129-P4 None MIR-129 UUUUUGC None None JH126644.1 619207 619275 + Gnathostomata Chordata Unknown 1
Mun-Mir-129-P4 None MIR-129 UUUUUGC None None LR594634.1 257500748 257500814 - Gnathostomata Chordata No 1
Pbv-Mir-129-P4 pbv-mir-129b MIR-129 UUUUUGC MIMAT0038924 MIMAT0038925 KE953229.1 75187 75254 - Gnathostomata Chordata No 1
Spt-Mir-129-P4 None MIR-129 UUUUUGC None None QEPC01005124.1 479208 479272 + Gnathostomata Chordata Unknown 1
Cmi-Mir-12488 None MIR-12488 UUUUUGC None None KI635864.1 11626459 11626518 - Chondrichthyes Chondrichthyes No
Sto-Mir-12488 None MIR-12488 UUUUUGC None None BFAA01003193.1 112829 112888 - Chondrichthyes Chondrichthyes Unknown

(red - mature/co-mature, blue - star)

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