| MirGeneDB ID | Eca-Mir-129-P2 |
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| Family name |
MIR-129 (all species) |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-129a
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| Paralogues |
Eca-Mir-129-P1
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| Orthologues |
Aca-Mir-129-P2
Ami-Mir-129-P2
Bta-Mir-129-P2
Cfa-Mir-129-P2
Cja-Mir-129-P2
Cli-Mir-129-P2
Cmi-Mir-129-P2
Cpi-Mir-129-P2
Cpo-Mir-129-P2
Dno-Mir-129-P2
Dre-Mir-129-P2a
Dre-Mir-129-P2b
Ete-Mir-129-P2
Gja-Mir-129-P2
Gmo-Mir-129-P2a
Gmo-Mir-129-P2b
Hsa-Mir-129-P2
Laf-Mir-129-P2
Lch-Mir-129-P2
Loc-Mir-129-P2
Mal-Mir-129-P2a
Mal-Mir-129-P2b
Mdo-Mir-129-P2
Mml-Mir-129-P2
Mmr-Mir-129-P2
Mmu-Mir-129-P2
Mun-Mir-129-P2
Neu-Mir-129-P2
Oan-Mir-129-P2
Ocu-Mir-129-P2
Pab-Mir-129-P2
Pbv-Mir-129-P2
Pma-Mir-129-o2
Rno-Mir-129-P2
Sha-Mir-129-P2
Spt-Mir-129-P2
Sto-Mir-129-P2
Tgu-Mir-129-P2
Tni-Mir-129-P2a
Tni-Mir-129-P2b
Xla-Mir-129-P2c
Xla-Mir-129-P2d
Xtr-Mir-129-P2
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| Node of Origin (locus) |
Gnathostomata
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| Node of Origin (family) |
Chordata
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009151.1: 83490179-83490244 [+]
UCSC
Ensembl
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| Seed |
UUUUUGC |
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Precursor
(pre-Mir +30nt flank) |
GUCCGAGCAGGGCUGCUGUCUUCUUUGGAUCUUUUUGCGGUCUGGGCUUGCUGUUCCUCUCAACAGUAGUCAGGAAGCCCUUACCCCAAAAAGUAUCUGCAGGAGGCCUUGUCUGCAGGGGAGAUG
Get precursor sequence
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| Structure | 10 20 30 40 50 60
GUCCGAGCAGGGCUGCU-- U -| C CU G UGUUCCUCUC
GUCUUCU UGGAU CUUUUUG GGU GGGCUU C \
CGGAGGA GUCUA GAAAAAC CCA CCCGAA G A
GUAGAGGGGACGUCUGUUC C U^ C UU G ACUGAUGACA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-129-P2_5p |
| mirBase accession | MIMAT0012932 |
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| Sequence |
0- CUUUUUGCGGUCUGGGCUUGC -21
Get sequence
|
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| Star sequence |
Eca-Mir-129-P2_3p* |
| mirBase accession | MIMAT0012933 |
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| Sequence |
44- AAGCCCUUACCCCAAAAAGUAU -66
Get sequence
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