MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-430-o20

Family name MIR-430 (all species)
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-430-o10  Sha-Mir-430-o11  Sha-Mir-430-o12  Sha-Mir-430-o13  Sha-Mir-430-o14  Sha-Mir-430-o15  Sha-Mir-430-o16  Sha-Mir-430-o17  Sha-Mir-430-o18  Sha-Mir-430-o19  Sha-Mir-430-o21  Sha-Mir-430-o22  Sha-Mir-430-o23  Sha-Mir-430-o24  Sha-Mir-430-o25  Sha-Mir-430-o26  Sha-Mir-430-o27  Sha-Mir-430-o29  Sha-Mir-430-P1  Sha-Mir-430-P2  Sha-Mir-430-P3  Sha-Mir-430-P51 
Orthologues Hsa-Mir-430-P20  Mml-Mir-430-P20  Pab-Mir-430-P20 
Node of Origin (locus) S. harrisii
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL850554.1: 15192-15251 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-o20)		 Mir-430-o24 GL850554.1: 7215-7274 [+] UCSC Ensembl
Mir-430-o25 GL850554.1: 7366-7425 [+] UCSC Ensembl
Mir-430-o29 GL850554.1: 7912-7971 [+] UCSC Ensembl
Mir-430-o10 GL850554.1: 8373-8431 [+] UCSC Ensembl
Mir-430-o11 GL850554.1: 9301-9361 [+] UCSC Ensembl
Mir-430-o12 GL850554.1: 9594-9645 [+] UCSC Ensembl
Mir-430-o13 GL850554.1: 10072-10130 [+] UCSC Ensembl
Mir-430-o14 GL850554.1: 10797-10856 [+] UCSC Ensembl
Mir-430-o15 GL850554.1: 11170-11227 [+] UCSC Ensembl
Mir-430-o16 GL850554.1: 11719-11778 [+] UCSC Ensembl
Mir-430-o17 GL850554.1: 13105-13161 [+] UCSC Ensembl
Mir-430-o18 GL850554.1: 14118-14177 [+] UCSC Ensembl
Mir-430-o19 GL850554.1: 14478-14536 [+] UCSC Ensembl
Mir-430-o20 GL850554.1: 15192-15251 [+] UCSC Ensembl
Mir-430-o21 GL850554.1: 15527-15586 [+] UCSC Ensembl
Seed AGGUGCU
Precursor
(pre-Mir +30nt flank)		 
UUUGAAUCCAGGGGCCACCCAACCUUGGUCACCCUAACUUGGGGCAUUUAUUGGGUCUUUGUGACAAAUAGGUGCUCUCUGUUGGGAUGAGCCAGGUUGAGGACUAUGCUUCCCACCAGU
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Structure
        10          20         30        40        50         
UUUGAAUCCAGGGGCCA-  -|     U  -   C      UU            GGGUCU 
                  CC CAACCU GG UCA CCUAAC  GGGGCAUUUAUU      U
                  GG GUUGGA CC AGU GGGUUG  UCUCGUGGAUAA      U
UGACCACCCUUCGUAUCA  A^     -  G   A      UC            ACAGUG 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-430-o20_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACCCUAACUUGGGGCAUUUAUU -22
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Mature sequence

Sha-Mir-430-o20_3p
mirBase accessionNone
Sequence 
38- UAGGUGCUCUCUGUUGGGAUGA -60
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