Mir-430-o24

MirGeneDB ID

Sha-Mir-430-o24

Family name

MIR-430 (all species)

Seed

AAGUGCU

Species

Tasmanian devil (Sarcophilus harrisii)

MiRBase ID

Paralogues

Sha-Mir-430-o10 Sha-Mir-430-o11 Sha-Mir-430-o12 Sha-Mir-430-o13 Sha-Mir-430-o14 Sha-Mir-430-o15 Sha-Mir-430-o16 Sha-Mir-430-o17 Sha-Mir-430-o18 Sha-Mir-430-o19 Sha-Mir-430-o20 Sha-Mir-430-o21 Sha-Mir-430-o22 Sha-Mir-430-o23 Sha-Mir-430-o25 Sha-Mir-430-o26 Sha-Mir-430-o27 Sha-Mir-430-o29 Sha-Mir-430-P1 Sha-Mir-430-P2 Sha-Mir-430-P3 Sha-Mir-430-P51

Orthologues

Hsa-Mir-430-P24 Mml-Mir-430-P24a1 Mml-Mir-430-P24a2 Mml-Mir-430-P24b

Node of Origin (locus)

S. harrisii

Node of Origin (family)

Vertebrata

Genome context
(DEVIL_add)

GL850554.1: 7215-7274 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GACCAUGUUAGAACAAACCUCUUCUAGCUCAUCCUAAUUGAGGGCAUUUGUUGGUUAUUUGAGGAACAUAAGUGCUCUCAAUUGGGGUAGAAUAGUCUGAGGAAGAAUCAUCCCGUGAGG

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Structure

        10         20         30         40        50         
GACCAUGUUAGAACAAA-    UU-|  GC  -                     UGGUUAU 
                  CCUC   CUA  UC AUCCUAAUUGAGGGCAUUUGU       U
                  GGAG   GAU  AG UGGGGUUAACUCUCGUGAAUA       U
GGAGUGCCCUACUAAGAA    UCU^  A-  A                     CAAGGAG 
.       110       100         90        80        70        60

Deep sequencing

3' NTU

Motifs

Tissue expression

Bo	Br	He	Ki	Li	Ly	Pa	Sk	Sp	Te

Star sequence

Sha-Mir-430-o24_5p* (predicted)

mirBase accession

None

Sequence

0- AUCCUAAUUGAGGGCAUUUGUU -22

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Mature sequence

Sha-Mir-430-o24_3p (predicted)

mirBase accession

None

Sequence

38- UAAGUGCUCUCAAUUGGGGUAG -60

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