MirGeneDB 2.1

MirGeneDB ID

Sha-Mir-430-o15

Family name MIR-430 (all species)
Seed AAGUGCU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-430-o10  Sha-Mir-430-o11  Sha-Mir-430-o12  Sha-Mir-430-o13  Sha-Mir-430-o14  Sha-Mir-430-o16  Sha-Mir-430-o17  Sha-Mir-430-o18  Sha-Mir-430-o19  Sha-Mir-430-o20  Sha-Mir-430-o21  Sha-Mir-430-o22  Sha-Mir-430-o23  Sha-Mir-430-o24  Sha-Mir-430-o25  Sha-Mir-430-o26  Sha-Mir-430-o27  Sha-Mir-430-o29  Sha-Mir-430-P1  Sha-Mir-430-P2  Sha-Mir-430-P3  Sha-Mir-430-P51 
Orthologues Hsa-Mir-430-P15 
Node of Origin (locus) S. harrisii
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)
GL850554.1: 11170-11227 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCAAGAUAAGACUAGUCUCUUCUGACACACCCUAACUGAGGGCAUUUAUUGGAUAUAUGAAAAGAUAAGUGCUCUCUGUGGGGUGAGACAGGUUGAGAACUGACCUCGCCAUACUG
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Structure
        10         20         30        40        50         
UUUCAAGAUAAGACUAG-    U-|   ACA       ACU             GGAUAU 
                  UCUC  UCUG   CACCCUA   GAGGGCAUUUAUU      \
                  AGAG  GGAC   GUGGGGU   CUCUCGUGAAUAG      A
GUCAUACCGCUCCAGUCA    UU^   AGA       GU-             AAAAGU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-430-o15_5p* (predicted)

mirBase accessionNone
Sequence
0- ACCCUAACUGAGGGCAUUUAUU -22
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Mature sequence

Sha-Mir-430-o15_3p

mirBase accessionNone
Sequence
37- UAAGUGCUCUCUGUGGGGUGA -58
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