MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-430-o27

Family name MIR-430 (all species)
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-430-o10  Sha-Mir-430-o11  Sha-Mir-430-o12  Sha-Mir-430-o13  Sha-Mir-430-o14  Sha-Mir-430-o15  Sha-Mir-430-o16  Sha-Mir-430-o17  Sha-Mir-430-o18  Sha-Mir-430-o19  Sha-Mir-430-o20  Sha-Mir-430-o21  Sha-Mir-430-o22  Sha-Mir-430-o23  Sha-Mir-430-o24  Sha-Mir-430-o25  Sha-Mir-430-o26  Sha-Mir-430-o29  Sha-Mir-430-P1  Sha-Mir-430-P2  Sha-Mir-430-P3  Sha-Mir-430-P51 
Orthologues Hsa-Mir-430-P27  Mml-Mir-430-P27a  Mml-Mir-430-P27b  Pab-Mir-430-P27 
Node of Origin (locus) S. harrisii
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL835236.1: 89874-89933 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-o27)		 Mir-430-o26 GL835236.1: 89594-89652 [+] UCSC Ensembl
Mir-430-o27 GL835236.1: 89874-89933 [+] UCSC Ensembl
Seed UUCUAAC
Precursor
(pre-Mir +30nt flank)		 
CAUUGAUGACUACACCACCCAGCCUUGCACAUUCUAACUCUGAGCACUUAUUGGAUAUGUAAGAAGCAUAAGUGCCCUCUGUUAGGAUGAGCCUGACUGAGGAUCAAGACUGUAUGACUU
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Structure
        10          20        30        40        50         
CAUUGAUGACUACACCA-  -|  CCUU  A         UCUGA        UGGAUAU 
                  CC CAG    GC CAUUCUAAC     GCACUUAU       G
                  GG GUC    CG GUAGGAUUG     CGUGAAUA       U
UUCAGUAUGUCAGAACUA  A^  AGUC  A         UCUCC        CGAAGAA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-430-o27_5p
mirBase accessionNone
Sequence 
0- AUUCUAACUCUGAGCACUUAUU -22
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Star sequence

Sha-Mir-430-o27_3p* (predicted)
mirBase accessionNone
Sequence 
38- UAAGUGCCCUCUGUUAGGAUGA -60
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