MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-456

Family name MIR-456 (all species)
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-456
Paralogues
Orthologues Aca-Mir-456  Ami-Mir-456  Cli-Mir-456  Cmi-Mir-456  Cpi-Mir-456  Dre-Mir-456  Ebu-Mir-456  Gga-Mir-456  Gja-Mir-456  Gmo-Mir-456  Lch-Mir-456  Loc-Mir-456  Mal-Mir-456  Mun-Mir-456  Pbv-Mir-456  Sto-Mir-456  Tgu-Mir-456  Xla-Mir-456-P1  Xla-Mir-456-P2  Xtr-Mir-456 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046074.1: 3682109-3682169 [-] UCSC Ensembl
Seed AGGCUGG
Precursor
(pre-Mir +30nt flank)		 
AAUCCUGGGACUUGGCUGUUAUGCCCGUGUGCAGGCAUCUUUCCAGCCUACACGUGGGGUCCUGAUUCUGCAGGCUGGUUAGAUGGUUGUCACAUGCAUGACUAAUGGCCGCAAUAUCUGC
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Structure
        10          20        30         40        50        60
AAUCCUGGGACUUGGCU--|      CC     -   G     UU       A  CGUGGGG 
                   GUUAUGC  GUGUG CAG CAUCU  CCAGCCU CA       U
                   CAGUACG  UACAC GUU GUAGA  GGUCGGA GU       C
CGUCUAUAACGCCGGUAAU^      --     U   G     UU       C  CUUAGUC 
 .       110       100          90        80        70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-456_5p* (predicted)
mirBase accessionNone
Sequence 
0- GCAGGCAUCUUUCCAGCCUACA -22
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Mature sequence

Pma-Mir-456_3p
mirBase accessionMIMAT0019554
Sequence 
40- CAGGCUGGUUAGAUGGUUGUC -61
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