| MirGeneDB ID | Pbv-Mir-456 |
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| Family name |
MIR-456 (all species) |
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| Species |
Burmese python (Python bivittatus) |
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| MiRBase ID |
pbv-mir-456
|
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| Paralogues |
|
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| Orthologues |
Aca-Mir-456
Ami-Mir-456
Cli-Mir-456
Cmi-Mir-456
Cpi-Mir-456
Dre-Mir-456
Ebu-Mir-456
Gga-Mir-456
Gja-Mir-456
Gmo-Mir-456
Lch-Mir-456
Loc-Mir-456
Mal-Mir-456
Mun-Mir-456
Pma-Mir-456
Sto-Mir-456
Tgu-Mir-456
Xla-Mir-456-P1
Xla-Mir-456-P2
Xtr-Mir-456
|
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| Node of Origin (locus) |
Vertebrata
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(GCA_000186305.2_Python_molurus_bivittatus) |
KE953008.1: 414059-414119 [+]
|
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| Seed |
AGGCUGG |
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Precursor
(pre-Mir +30nt flank) |
AACAACAUGUACAUUGUUGUGUAUGUGUGCGCAGGCAUCUUCUCAGCCUACAUGUGGAUUCUUAAAUCUGCAGGCUGGUUAGAUGGUUGUCAUACAUUCAUCAGAUAUCUGCUUAAAUAUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AACAACAUGUACAUUGUU--| U C G UC A UGUGGAU
GUG AUGUGUG GCAG CAUCU UCAGCCU CA U
UAC UACAUAC UGUU GUAGA GGUCGGA GU C
AUAUAAAUUCGUCUAUAGAC^ U - G UU C CUAAAUU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Pbv-Mir-456_5p* |
| mirBase accession | MIMAT0039059 |
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| Sequence |
0- GCAGGCAUCUUCUCAGCCUACA -22
Get sequence
|
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| Mature sequence |
Pbv-Mir-456_3p |
| mirBase accession | MIMAT0039060 |
|---|
| Sequence |
40- CAGGCUGGUUAGAUGGUUGUC -61
Get sequence
|
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