MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-337

Family name MIR-337 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Cja-Mir-337  Cpo-Mir-337-v1  Dno-Mir-337-v1  Eca-Mir-337  Eca-Mir-337-as  Hsa-Mir-337-as  Hsa-Mir-337-v1  Laf-Mir-337  Mml-Mir-337-as  Mml-Mir-337-v1  Mmr-Mir-337-v1  Mmu-Mir-337  Mmu-Mir-337-as  Ocu-Mir-337-as  Ocu-Mir-337-v1  Rno-Mir-337  Rno-Mir-337-as 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054694.2: 105300631-105300690 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-337)
Mir-770 CM054694.2: 105276468-105276529 [+] UCSC Ensembl
Mir-493 CM054694.2: 105293438-105293499 [+] UCSC Ensembl
Mir-337 CM054694.2: 105300631-105300690 [+] UCSC Ensembl
Mir-431 CM054694.2: 105307145-105307208 [+] UCSC Ensembl
Mir-433 CM054694.2: 105308016-105308089 [+] UCSC Ensembl
Mir-127 CM054694.2: 105309120-105309175 [+] UCSC Ensembl
Mir-432 CM054694.2: 105310618-105310686 [+] UCSC Ensembl
Mir-136 CM054694.2: 105310838-105310893 [+] UCSC Ensembl
Mir-370 CM054694.2: 105337141-105337197 [+] UCSC Ensembl
Seed AACGGCU
Precursor
(pre-Mir +30nt flank)
UGCGGCCCGUAGUCAGUAGUUGGGGGGUGGGAACGGCUUCAUACAGGAGUUGAUGCACAGUUAUCCAGCUCCUAUAUGAUGCCUUUCUUCAUCCCCUUCAACCACGCGCAGCCCCCGGAC
Get precursor sequence
Structure
        10        20           30        40        50         
UGCGGCCCGUAGUCAGUA    --       -|   C   U     C       GAUGCAC 
                  GUUG  GGGGGUG GGAA GGC UCAUA AGGAGUU       \
                  CAAC  CCCCUAC UCUU CCG AGUAU UCCUCGA       A
CAGGCCCCCGACGCGCAC    UU       U^   U   U     A       CCUAUUG 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
- +
Br Br Li Li
Mature sequence

Pab-Mir-337_5p

mirBase accessionNone
Sequence
0- GAACGGCUUCAUACAGGAGUU -21
Get sequence
Star sequence

Pab-Mir-337_3p* (predicted)

mirBase accessionNone
Sequence
38- CUCCUAUAUGAUGCCUUUCUUC -60
Get sequence