MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-493

Family name MIR-493 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-493  Cfa-Mir-493  Cja-Mir-493  Cpo-Mir-493  Dno-Mir-493  Eca-Mir-493  Ete-Mir-493  Hsa-Mir-493  Laf-Mir-493  Mml-Mir-493  Mmr-Mir-493  Mmu-Mir-493  Ocu-Mir-493  Rno-Mir-493 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054694.2: 105293438-105293499 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-493)		 Mir-770 CM054694.2: 105276468-105276529 [+] UCSC Ensembl
Mir-493 CM054694.2: 105293438-105293499 [+] UCSC Ensembl
Mir-337 CM054694.2: 105300631-105300690 [+] UCSC Ensembl
Mir-431 CM054694.2: 105307145-105307208 [+] UCSC Ensembl
Mir-433 CM054694.2: 105308016-105308089 [+] UCSC Ensembl
Mir-127 CM054694.2: 105309120-105309175 [+] UCSC Ensembl
Mir-432 CM054694.2: 105310618-105310686 [+] UCSC Ensembl
Mir-136 CM054694.2: 105310838-105310893 [+] UCSC Ensembl
Mir-370 CM054694.2: 105337141-105337197 [+] UCSC Ensembl
Seed UGUACAU
Precursor
(pre-Mir +30nt flank)		 
GCUUCAGGGCUCAUUCUGGCCUCCAGGGCUUUGUACAUGGUAGGCUUUCAUUCAUUCGUUUGCACAUUCGGUGAAGGUCUACUGUGUGCCAGGCCCUGUGCCAGGCAUCGUGUAGAUGGACG
Get precursor sequence
Structure
        10           20        30        40        50        60 
GCUUCAGGGCUCAUUCU---|  CUC        U                    CAUUCGUU 
                    GGC   CAGGGCUU GUACAUGGUAGGCUUUCAUU        \
                    CCG   GUCCCGGA CGUGUGUCAUCUGGAAGUGG        U
GCAGGUAGAUGUGCUACGGA^  U--        C                    CUUACACG 
120       110       100          90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
- +
Br Br Li Li
Mature sequence

Pab-Mir-493_5p
mirBase accessionNone
Sequence 
0- UUGUACAUGGUAGGCUUUCAUU -22
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Star sequence

Pab-Mir-493_3p*
mirBase accessionNone
Sequence 
41- UGAAGGUCUACUGUGUGCCAG -62
Get sequence