| MirGeneDB ID | Ocu-Mir-493 |
|---|
| Family name |
MIR-493 (all species) |
|---|
| Seed |
UGUAUGU |
|---|
| Species |
Rabbit (Oryctolagus cuniculus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-493
Cfa-Mir-493
Cpo-Mir-493
Dno-Mir-493
Ete-Mir-493
Hsa-Mir-493
Mml-Mir-493
Mmu-Mir-493
Rno-Mir-493
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(oryCun2_add) |
1989487067: 219-280 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCGCCGUGGCUCACUCUGGCCUCCAGGGCCUUGUAUGUGGCAGGCUUUCAUUCAUUCGUUGCAUGUCCGGUGAAGGUCUGCUAUGUGCCAAGCCCUGUGCCAGCCAUCGUGUAACGGAGCUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UCGCCGUGGCUCACUCU----| CUC CUU CAUUCGU
GGC CAGGGC GUAUGUGGCAGGCUUUCAUU U
CCG GUCCCG CGUGUAUCGUCUGGAAGUGG G
CUCGAGGCAAUGUGCUACCGA^ U-- AAC CCUGUAC
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | Not in assembly but in trace archive. |
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Ocu-Mir-493_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUGUAUGUGGCAGGCUUUCAUU -22
Get sequence
|
|---|
| Co-mature sequence |
Ocu-Mir-493_3p |
| mirBase accession | None |
|---|
| Sequence |
40- UGAAGGUCUGCUAUGUGCCAAG -62
Get sequence
|
|---|
