MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-493

Family name MIR-493 (all species)
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-493  Cfa-Mir-493  Cja-Mir-493  Cpo-Mir-493  Dno-Mir-493  Eca-Mir-493  Ete-Mir-493  Hsa-Mir-493  Mml-Mir-493  Mmr-Mir-493  Mmu-Mir-493  Ocu-Mir-493  Pab-Mir-493  Rno-Mir-493 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75678752-75678809 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-493)		 Mir-136 GL010036.1: 75660902-75660957 [-] UCSC Ensembl
Mir-127 GL010036.1: 75662711-75662766 [-] UCSC Ensembl
Mir-433 GL010036.1: 75663797-75663870 [-] UCSC Ensembl
Mir-431 GL010036.1: 75664666-75664729 [-] UCSC Ensembl
Mir-337 GL010036.1: 75676529-75676588 [-] UCSC Ensembl
Mir-493 GL010036.1: 75678752-75678809 [-] UCSC Ensembl
Seed UGUACAC
Precursor
(pre-Mir +30nt flank)		 
GCUUCAGGUCUCAUUCUGGCCUCCAGGGCCUUGUACACCCUAGGCUUUCAUUCAUUGCACAUCCAGUGAAGGCCUACUGUGUGCCAGGCCCUCGGCGACACACACGCGCCACAGAUGC
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Structure
        10            20        30        40        50        
GCUUCAGGUCUCAUUCUG----|  UCC       U      CC            CAUUG 
                      GCC   AGGGCCU GUACAC  UAGGCUUUCAUU     C
                      CGG   UCCCGGA CGUGUG  AUCCGGAAGUGA     A
CGUAGACACCGCGCACACACAG^  C--       C      UC            CCUAC 
      110       100          90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
- +
Wh
Mature sequence

Laf-Mir-493_5p (predicted)
mirBase accessionNone
Sequence 
0- UUGUACACCCUAGGCUUUCAUU -22
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Star sequence

Laf-Mir-493_3p* (predicted)
mirBase accessionNone
Sequence 
36- UGAAGGCCUACUGUGUGCCAGG -58
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