MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-127

Family name MIR-127 (all species)
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-127  Cfa-Mir-127  Cja-Mir-127  Cpo-Mir-127  Dno-Mir-127  Eca-Mir-127  Ete-Mir-127  Hsa-Mir-127  Laf-Mir-127  Mml-Mir-127  Mmr-Mir-127  Mmu-Mir-127  Ocu-Mir-127  Rno-Mir-127 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054694.2: 105309120-105309175 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-127)		 Mir-770 CM054694.2: 105276468-105276529 [+] UCSC Ensembl
Mir-493 CM054694.2: 105293438-105293499 [+] UCSC Ensembl
Mir-337 CM054694.2: 105300631-105300690 [+] UCSC Ensembl
Mir-431 CM054694.2: 105307145-105307208 [+] UCSC Ensembl
Mir-433 CM054694.2: 105308016-105308089 [+] UCSC Ensembl
Mir-127 CM054694.2: 105309120-105309175 [+] UCSC Ensembl
Mir-432 CM054694.2: 105310618-105310686 [+] UCSC Ensembl
Mir-136 CM054694.2: 105310838-105310893 [+] UCSC Ensembl
Mir-370 CM054694.2: 105337141-105337197 [+] UCSC Ensembl
Seed UGAAGCU
Precursor
(pre-Mir +30nt flank)		 
GGUCUCGCUGUGAUCACUGUCUCCAGCCUGCUGAAGCUCAGAGGGCUCUGAUUCAGAAAGAUCAUCGGAUCCGUCUGAGCUUGGCUGGUCGGAAGUCUCAUCAUCUGCUUCCUUCG
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Structure
        10        20          30        40        50        
GGUCUCGCUGUGAUCACUGUC--|  A   U   G         G  C      UCAGA 
                       UCC GCC GCU AAGCUCAGA GG UCUGAU     \
                       AGG UGG CGG UUCGAGUCU CC AGGCUA     A
GCUUCCUUCGUCUACUACUCUGA^  C   U   -         G  U      CUAGA 
    110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Li Li
Mature sequence

Pab-Mir-127_5p
mirBase accessionNone
Sequence 
0- CUGAAGCUCAGAGGGCUCUGAUU -23
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Co-mature sequence

Pab-Mir-127_3p
mirBase accessionNone
Sequence 
34- UCGGAUCCGUCUGAGCUUGGCU -56
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