MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-127

Family name MIR-127 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-127
Paralogues
Orthologues Bta-Mir-127  Cfa-Mir-127  Cja-Mir-127  Cpo-Mir-127  Dno-Mir-127  Ete-Mir-127  Hsa-Mir-127  Laf-Mir-127  Mml-Mir-127  Mmr-Mir-127  Mmu-Mir-127  Ocu-Mir-127  Pab-Mir-127  Rno-Mir-127 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009171.1: 43185829-43185884 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-127)		 Mir-770 CM009171.1: 43150346-43150401 [+] UCSC Ensembl
Mir-493 CM009171.1: 43167648-43167710 [+] UCSC Ensembl
Mir-337-as CM009171.1: 43177990-43178049 [-] UCSC Ensembl
Mir-337 CM009171.1: 43177992-43178051 [+] UCSC Ensembl
Mir-431 CM009171.1: 43183848-43183911 [+] UCSC Ensembl
Mir-433 CM009171.1: 43184725-43184798 [+] UCSC Ensembl
Mir-127 CM009171.1: 43185829-43185884 [+] UCSC Ensembl
Mir-432 CM009171.1: 43187318-43187386 [+] UCSC Ensembl
Mir-136-v2 CM009171.1: 43187505-43187560 [+] UCSC Ensembl
Mir-136-v1 CM009171.1: 43187505-43187560 [+] UCSC Ensembl
Mir-370 CM009171.1: 43212467-43212523 [+] UCSC Ensembl
Seed CGGAUCC
Precursor
(pre-Mir +30nt flank)		 
GGUCUCGCUGUGAUCACUGUCUCCAGCCUGCUGAAGCUCAGAGGGCUCUGAUUCAGAAAGAUCAUCGGAUCCGUCUGAGCUUGGCUGGUCGGAAGUCUCAUCAUCUGCUUCCUUCG
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Structure
        10        20          30        40        50        
GGUCUCGCUGUGAUCACUGUC--|  A   U   G         G  C      UCAGA 
                       UCC GCC GCU AAGCUCAGA GG UCUGAU     \
                       AGG UGG CGG UUCGAGUCU CC AGGCUA     A
GCUUCCUUCGUCUACUACUCUGA^  C   U   -         G  U      CUAGA 
    110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-127_5p*
mirBase accessionNone
Sequence 
0- CUGAAGCUCAGAGGGCUCUGAUU -23
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Mature sequence

Eca-Mir-127_3p
mirBase accessionMIMAT0013126
Sequence 
34- UCGGAUCCGUCUGAGCUUGGCU -56
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