MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-193-P1a

Family name MIR-193 (all species)
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-193-P1b  Mun-Mir-193-P2a  Mun-Mir-193-P2b 
Orthologues Aae-Mir-193-P1  Aga-Mir-193-P1  Ami-Mir-193-P1a  Bge-Mir-193-P1  Bta-Mir-193-P1a  Cbr-Mir-193-P1-v1  Cel-Mir-193-P1-v1  Cfa-Mir-193-P1a  Cja-Mir-193-P1a  Cli-Mir-193-P1a  Cmi-Mir-193-P1a  Cpi-Mir-193-P1a  Cpo-Mir-193-P1a  Cte-Mir-193-P1  Dan-Mir-193-P1-v1  Dgr-Mir-193-P1  Dlo-Mir-193-P1  Dma-Mir-193-P1  Dme-Mir-193-P1-v1  Dmo-Mir-193-P1-v1  Dno-Mir-193-P1a  Dpu-Mir-193-P1  Dre-Mir-193-P1a  Dsi-Mir-193-P1-v1  Dya-Mir-193-P1-v1  Eba-Mir-193-P1  Eca-Mir-193-P1a  Esc-Mir-193-P1  Ete-Mir-193-P1a  Gga-Mir-193-P1a  Gpa-Mir-193-P1  Hme-Mir-193-P1  Hru-Mir-193-P1  Hsa-Mir-193-P1a  Isc-Mir-193-P1  Laf-Mir-193-P1a  Lch-Mir-193-P1a  Lgi-Mir-193-P1  Lhy-Mir-193-P1  Loc-Mir-193-P1a  Mdo-Mir-193-P1a  Mgi-Mir-193-P1  Mml-Mir-193-P1a  Mmr-Mir-193-P1a  Mmu-Mir-193-P1a  Mom-Mir-193-P1  Npo-Mir-193-P1  Oan-Mir-193-P1a  Obi-Mir-193-P1  Ocu-Mir-193-P1a  Ofu-Mir-193-P1  Ovu-Mir-193-P1  Pab-Mir-193-P1a  Pau-Mir-193-P1  Pbv-Mir-193-P1a  Pcr-Mir-193-P1  Pma-Mir-193-P1  Pmi-Mir-193-P1  Pve-Mir-193-P1  Rno-Mir-193-P1a  Rph-Mir-193-P1  Sha-Mir-193-P1a  Snu-Mir-193-P1  Spt-Mir-193-P1a  Sto-Mir-193-P1a  Tca-Mir-193-P1  Tgu-Mir-193-P1a  War-Mir-193-P1  Xbo-Mir-193-P1  Xla-Mir-193-P1a3  Xla-Mir-193-P1a4  Xtr-Mir-193-P1a 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(GCA_901765095.2_aMicUni1.2)		 LR594639.1: 36350726-36350786 [+]
Clustered miRNAs
(< 50kb from Mir-193-P1a)		 Mir-193-P1a LR594639.1: 36350726-36350786 [+]
Mir-193-P2a LR594639.1: 36382121-36382182 [+]
Seed ACUGGCC
Precursor
(pre-Mir +30nt flank)		 
AUGAUCUUCGGAAGGCUGUGGUUCCGGAGUCGGGAUUUUGGGGGCGAGAUGUGCUGAUUUGUUUUAUCCAACUGGCCCGCAAAGUCCCGCUUCUGGUGGCCGCCUUAUUCUGCACAAAUUA
Get precursor sequence
Structure
        10         20         30        40        50          
AUGAUCUUCGGAAGGCU-      -|     U          G    G  A  UGCUGAUU 
                  GUGGUU CCGGAG CGGGAUUUUG GGGC AG UG        \
                  CGCCGG GGUCUU GCCCUGAAAC CCCG UC AC        U
AUUAAACACGUCUUAUUC      U^     C          G    G  A  CUAUUUUG 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
To
Star sequence

Mun-Mir-193-P1a_5p*
mirBase accessionNone
Sequence 
0- CGGGAUUUUGGGGGCGAGAUGU -22
Get sequence
Mature sequence

Mun-Mir-193-P1a_3p
mirBase accessionNone
Sequence 
39- AACUGGCCCGCAAAGUCCCGCU -61
Get sequence