MirGeneDB 2.1
MirGeneDB ID

Mun-Mir-133-P4-v2

Family name MIR-133 (all species)
Seed UGGUCCC
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-133-P1-v1  Mun-Mir-133-P1-v2  Mun-Mir-133-P2-v1  Mun-Mir-133-P2-v2  Mun-Mir-133-P3-v1  Mun-Mir-133-P3-v2  Mun-Mir-133-P4-v1 
Orthologues Aae-Mir-133  Aca-Mir-133-P4-v1  Aca-Mir-133-P4-v2  Ami-Mir-133-P4-v1  Ami-Mir-133-P4-v2  Asu-Mir-133  Bge-Mir-133  Cbr-Mir-133  Cel-Mir-133  Cgi-Mir-133  Cin-Mir-133  Cli-Mir-133-P4-v1  Cli-Mir-133-P4-v2  Cmi-Mir-133-P4-v1  Cmi-Mir-133-P4-v2  Cpi-Mir-133-P4-v1  Cpi-Mir-133-P4-v2  Cte-Mir-133  Dan-Mir-133  Dma-Mir-133  Dme-Mir-133  Dmo-Mir-133  Dpu-Mir-133  Dsi-Mir-133  Dya-Mir-133  Efe-Mir-133  Esc-Mir-133  Gga-Mir-133-P4-v1  Gga-Mir-133-P4-v2  Gja-Mir-133-P4-v1  Gja-Mir-133-P4-v2  Hme-Mir-133  Isc-Mir-133  Lan-Mir-133  Lch-Mir-133-P4  Lgi-Mir-133  Oan-Mir-133-P4-v1  Oan-Mir-133-P4-v2  Obi-Mir-133  Ovu-Mir-133  Pbv-Mir-133-P4-v1  Pbv-Mir-133-P4-v2  Pma-Mir-133-o4-v1  Pma-Mir-133-o4-v2  Spt-Mir-133-P4  Spu-Mir-133  Sto-Mir-133-P4-v1  Sto-Mir-133-P4-v2  Tca-Mir-133  Tgu-Mir-133-P4-v1  Tgu-Mir-133-P4-v2  Xbo-Mir-133  Xla-Mir-133-P4a  Xla-Mir-133-P4b  Xtr-Mir-133-P4-v1  Xtr-Mir-133-P4-v2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(Mun_miRNA_loci)		 133-P4-v1_LR594642.1:203284452-203284709: 101-158 [+]
Precursor
(pre-Mir +30nt flank)
GGACUGGCCAAACAACUGCUUUUUGCUGGAGCUGGUAAAAAGGAACCAGAUCAACUCUAAACUGGAUUUGGUCCCCUUCAACCAGCAGCAGCUAUGCAUCAGAUCUACAGUCACUGCC
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Structure
        10            20        30        40         50        
GGACUGGCCAAACAACU----| UUUUU    GA      AAA    A-       CAACUC 
                     GC     GCUG  GCUGGU   AAGG  ACCAGAU      U
                     CG     CGAC  CGACCA   UUCC  UGGUUUA      A
CCGUCACUGACAUCUAGACUA^ UAU--    GA      AC-    CC       GGUCAA 
      110       100          90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Mun-Mir-133-P4-v2_5p* (predicted)
mirBase accessionNone
Sequence 
0- GCUGGUAAAAAGGAACCAGAU -21
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Mature sequence

Mun-Mir-133-P4-v2_3p
mirBase accessionNone
Sequence 
37- UUGGUCCCCUUCAACCAGCAG -58
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