MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-124-P3-v1

Family name MIR-124 (all species)
Seed AAGGCAC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-124-3
Paralogues Mmu-Mir-124-P1-v1  Mmu-Mir-124-P1-v2  Mmu-Mir-124-P2-v1  Mmu-Mir-124-P2-v2  Mmu-Mir-124-P3-v2 
Orthologues Aae-Mir-124  Aca-Mir-124-P3-v1  Aca-Mir-124-P3-v2  Ami-Mir-124-P3-v1  Ami-Mir-124-P3-v2  Asu-Mir-124  Bfl-Mir-124  Bge-Mir-124  Bla-Mir-124  Bta-Mir-124-P3-v1  Bta-Mir-124-P3-v2  Cel-Mir-124  Cfa-Mir-124-P3-v1  Cfa-Mir-124-P3-v2  Cli-Mir-124-P3-v1  Cli-Mir-124-P3-v2  Cmi-Mir-124-P3-v1  Cmi-Mir-124-P3-v2  Cpi-Mir-124-P3-v1  Cpi-Mir-124-P3-v2  Cpo-Mir-124-P3-v1  Cpo-Mir-124-P3-v2  Cte-Mir-124  Dan-Mir-124  Dma-Mir-124  Dme-Mir-124  Dmo-Mir-124  Dno-Mir-124-P3-v1  Dno-Mir-124-P3-v2  Dpu-Mir-124  Dre-Mir-124-P3a-v1  Dre-Mir-124-P3a-v2  Dre-Mir-124-P3b-v1  Dre-Mir-124-P3b-v2  Dsi-Mir-124  Dya-Mir-124  Esc-Mir-124  Gga-Mir-124-P3-v1  Gga-Mir-124-P3-v2  Gja-Mir-124-P3-v1  Gja-Mir-124-P3-v2  Gmo-Mir-124-P3a-v1  Gmo-Mir-124-P3a-v2  Gmo-Mir-124-P3b-v1  Gmo-Mir-124-P3b-v2  Hme-Mir-124  Hsa-Mir-124-P3-v1  Hsa-Mir-124-P3-v2  Isc-Mir-124  Lan-Mir-124  Lch-Mir-124-P3  Loc-Mir-124-P3-v1  Loc-Mir-124-P3-v2  Mal-Mir-124-P3a-v1  Mal-Mir-124-P3a-v2  Mal-Mir-124-P3b-v1  Mal-Mir-124-P3b-v2  Mdo-Mir-124-P3-v1  Mdo-Mir-124-P3-v2  Mml-Mir-124-P3-v1  Mml-Mir-124-P3-v2  Mun-Mir-124-P3-v1  Mun-Mir-124-P3-v2  Npo-Mir-124  Oan-Mir-124-P3-v1  Oan-Mir-124-P3-v2  Obi-Mir-124  Ocu-Mir-124-P3-v1  Ocu-Mir-124-P3-v2  Ovu-Mir-124  Pbv-Mir-124-P3-v1  Pbv-Mir-124-P3-v2  Pfl-Mir-124  Pma-Mir-124-o3  Pmi-Mir-124  Rno-Mir-124-P3-v1  Rno-Mir-124-P3-v2  Sha-Mir-124-P3-v1  Sha-Mir-124-P3-v2  Sko-Mir-124  Spt-Mir-124-P3e  Spt-Mir-124-P3f  Spu-Mir-124  Sto-Mir-124-P3-v1  Sto-Mir-124-P3-v2  Tca-Mir-124  Tgu-Mir-124-P3-v1  Tgu-Mir-124-P3-v2  Xbo-Mir-124  Xla-Mir-124-P3c-v1  Xla-Mir-124-P3c-v2  Xla-Mir-124-P3d-v1  Xla-Mir-124-P3d-v2  Xtr-Mir-124-P3-v1  Xtr-Mir-124-P3-v2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(mm10)
chr2: 180894045-180894104 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-124-P3-v1)
Mir-124-P3-v1 chr2: 180894045-180894104 [+] UCSC Ensembl
Mir-124-P3-v2 chr2: 180894045-180894103 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGCCCGCCGCAGCCCUGAGGGCCCCUCUGCGUGUUCACAGCGGACCUUGAUUUAAUGUCUAUACAAUUAAGGCACGCGGUGAAUGCCAAGAGAGGCGCCUCCGCCGCUCCUUUCUCAUG
Get precursor sequence
Structure
        10         20          30        40        50         
CCGCCCGCCGCAGCCCU-    -   C   -| C        A   GA       UUAAUG 
                  GAGG GCC CUC UG GUGUUCAC GCG  CCUUGAU      U
                  CUCC CGG GAG AC CGUAAGUG CGC  GGAAUUA      C
GUACUCUUUCCUCGCCGC    G   A   A^ -        G   AC       ACAUAU 
.       110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-124-P3-v1_5p*

mirBase accessionMIMAT0004527
Sequence
0- CGUGUUCACAGCGGACCUUGAU -22
Get sequence
Proposed targets microrna.org: MIMAT0004527
TargetScanVert: mmu-miR-124-5p
miRDB: MIMAT0004527
Mature sequence

Mmu-Mir-124-P3-v1_3p

mirBase accessionMIMAT0000134
Sequence
38- UAAGGCACGCGGUGAAUGCCAA -60
Get sequence
Proposed targets microrna.org: MIMAT0000134
TargetScanVert: mmu-miR-124-3p.1
miRDB: MIMAT0000134