MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-130-P2a

Family name MIR-130 (all species)
Species Human (Homo sapiens)
MiRBase ID hsa-mir-301b
Paralogues Hsa-Mir-130-P1c  Hsa-Mir-130-P2b  Hsa-Mir-130-P3b  Hsa-Mir-130-P4a 
Orthologues Aca-Mir-130-P2a  Ami-Mir-130-P2a  Bta-Mir-130-P2a  Cfa-Mir-130-P2a  Cja-Mir-130-P2a  Cli-Mir-130-P2a  Cmi-Mir-130-P2a  Cpi-Mir-130-P2a  Cpo-Mir-130-P2a  Dno-Mir-130-P2a  Dre-Mir-130-P2a1  Dre-Mir-130-P2a2  Eca-Mir-130-P2a  Gga-Mir-130-P2a  Gja-Mir-130-P2a  Gmo-Mir-130-P2a1  Gmo-Mir-130-P2a2  Laf-Mir-130-P2a  Lch-Mir-130-P2a  Loc-Mir-130-P2a  Mal-Mir-130-P2a1  Mal-Mir-130-P2a2  Mml-Mir-130-P2a  Mmr-Mir-130-P2a  Mmu-Mir-130-P2a  Mun-Mir-130-P2a  Oan-Mir-130-P2a  Ocu-Mir-130-P2a  Pab-Mir-130-P2a  Pbv-Mir-130-P2a  Rno-Mir-130-P2a  Spt-Mir-130-P2a  Sto-Mir-130-P2a  Tgu-Mir-130-P2a  Tni-Mir-130-P2a2  Xla-Mir-130-P2a3  Xla-Mir-130-P2a4  Xtr-Mir-130-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(hg38)		 chr22: 21652990-21653049 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-130-P2a)		 Mir-130-P2a chr22: 21652990-21653049 [+] UCSC Ensembl
Mir-130-P4a chr22: 21653316-21653375 [+] UCSC Ensembl
Seed AGUGCAA
Precursor
(pre-Mir +30nt flank)		 
GUGGUGGGGUCCCCCCUGCUGGCCGCAGGUGCUCUGACGAGGUUGCACUACUGUGCUCUGAGAAGCAGUGCAAUGAUAUUGUCAAAGCAUCUGGGACCAGCCUUGGGGAUCUCCCUCCCU
Get precursor sequence
Structure
        10          20         30        40           50        
GUGGUGGGGUCCCCCCU--     -  G        C      G---|       A  GUGCU 
                   GCUGG CC CAGGUGCU UGACGA    GUUGCACU CU     \
                   CGACC GG GUCUACGA ACUGUU    UAACGUGA GA     C
UCCCUCCCUCUAGGGGUUC     A  -        A      AUAG^       C  AGAGU 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-130-P2a_5p*
mirBase accessionMIMAT0032026
Sequence 
0- GCUCUGACGAGGUUGCACUACU -22
Get sequence
Proposed targets TargetScanVert: hsa-miR-301b-5p
miRDB: MIMAT0032026
Mature sequence

Hsa-Mir-130-P2a_3p
mirBase accessionMIMAT0004958
Sequence 
35- CAGUGCAAUGAUAUUGUCAAAGCAU -60
Get sequence
Proposed targets microrna.org: MIMAT0004958
TargetScanVert: hsa-miR-301b-3p
miRDB: MIMAT0004958