MirGeneDB 2.1
MirGeneDB ID

Ebu-Mir-1329

Family name MIR-1329 (all species)
Seed ACAGUGA
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues
Orthologues Aca-Mir-1329-v1  Aca-Mir-1329-v2  Ami-Mir-1329  Bta-Mir-1329  Cli-Mir-1329-v1  Cli-Mir-1329-v2  Cmi-Mir-1329  Cpi-Mir-1329-v1  Cpi-Mir-1329-v2  Gga-Mir-1329-v1  Gga-Mir-1329-v2  Gja-Mir-1329-v1  Gja-Mir-1329-v2  Mdo-Mir-1329  Mun-Mir-1329  Oan-Mir-1329-v1  Oan-Mir-1329-v2  Pbv-Mir-1329  Pma-Mir-1329  Sha-Mir-1329  Spt-Mir-1329  Sto-Mir-1329  Tgu-Mir-1329-v1  Tgu-Mir-1329-v2  Xla-Mir-1329-P1  Xla-Mir-1329-P2  Xtr-Mir-1329 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02010672.1: 1352125-1352194 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGGUGAGUGUGUUGAGACACAUGGCGGUCGACAGUGACCAGGUUUUGACGGUGAAAUCUGCCGAACCACUCACCAGCAGGUCAAGAUCGUCACUGUAGUCCACGCUGAAAACUGACACAAAACAUUAUG
Get precursor sequence
Structure
        10        20        30          40        50         60     
CCGGUGAGUGUGUUGAGACACAU    GUCG--|       CA         G-  GAAAUCUGCCG 
                       GGCG      ACAGUGAC  GGUUUUGAC  GU           \
                       UCGC      UGUCACUG  CUAGAACUG  CG           A
GUAUUACAAAACACAGUCAAAAG    ACCUGA^       --         GA  ACCACUCACCA 
.       120       110       100        90          80        70
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-1329_5p (predicted)
mirBase accessionNone
Sequence 
0- GACAGUGACCAGGUUUUGACGGU -23
Get sequence
Star sequence

Ebu-Mir-1329_3p* (predicted)
mirBase accessionNone
Sequence 
49- GGUCAAGAUCGUCACUGUAGU -70
Get sequence