MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-10-P3r1

Family name MIR-10 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-10-P1q1-v1  Csc-Mir-10-P1q2-v1  Csc-Mir-10-P1q3-v1  Csc-Mir-10-P1r  Csc-Mir-10-P2r1  Csc-Mir-10-P2r2  Csc-Mir-10-P3r2  Csc-Mir-10-P4q  Csc-Mir-10-P4r 
Orthologues Aae-Mir-10-P3  Adi-Mir-10  Aga-Mir-10-P3  Agr-Mir-10-P3  Asp-Mir-10  Asu-Mir-10-P3  Bfl-Mir-10-P3  Bge-Mir-10-P3  Bko-Mir-10-P3  Bla-Mir-10-P3  Bpl-Mir-10-P3  Cin-Mir-10-P3  Cte-Mir-10-P3  Dan-Mir-10-P3  Dlo-Mir-10-P3  Dma-Mir-10-P3  Dme-Mir-10-P3  Dmo-Mir-10-P3  Dpu-Mir-10-P3  Dsi-Mir-10-P3  Dya-Mir-10-P3  Eba-Mir-10-P3  Egr-Mir-10-P3  Esc-Mir-10-P3  Gpa-Mir-10-P3  Gsa-Mir-10-P3  Gsp-Mir-10-P3  Hru-Mir-10-P3  Isc-Mir-10-P3  Lan-Mir-10-P3  Lgi-Mir-10-P3  Lhy-Mir-10-P3  Llo-Mir-10-P3  Mgi-Mir-10-P3  Mom-Mir-10-P3  Nag-Mir-10-P3-v1  Nve-Mir-10  Obi-Mir-10-P3  Ofu-Mir-10-P3  Ovu-Mir-10-P3  Pau-Mir-10-P3  Pca-Mir-10-P3  Pcr-Mir-10-P3  Pdu-Mir-10-P3  Ple-Mir-10-P3  Pmi-Mir-10-P3  Pve-Mir-10-P3  Rph-Mir-10-P3  Sko-Mir-10-P3  Snu-Mir-10-P3  Spu-Mir-10-P3  Tca-Mir-10-P3  War-Mir-10-P3  Xbo-Mir-10-P3 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Eumetazoa
Genome context
(GCF_000671375.1_CSC)		 NW_019384344.1: 397903-397958 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-10-P3r1)		 Mir-10-P2r2 NW_019384344.1: 385704-385766 [+] Ensembl
Let-7-P18b NW_019384344.1: 386477-386544 [+] Ensembl
Mir-10-P2r1 NW_019384344.1: 388111-388173 [+] Ensembl
Let-7-P18a NW_019384344.1: 388884-388951 [+] Ensembl
Mir-10-P3r2 NW_019384344.1: 391437-391492 [+] Ensembl
Mir-10-P3r1 NW_019384344.1: 397903-397958 [+] Ensembl
Seed CCCUGAG
Precursor
(pre-Mir +30nt flank)		 
AGUAUUCGACAAGAAUUCCCUGUUCCCCACUCCCUGAGACCCUAACUUGUGAUGCAAUCCUGUCACAGGUUAGUCUCUCAGGUCCUGGGUAGCAGGCGACCUCAUAUUCAUCAGAA
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Structure
        10          20        30        40        50       
AGUAUUCGACAAGAAUUC--|     C    CUC       CC           UGCA 
                    CCUGUU CCCA   CCUGAGA  CUAACUUGUGA    A
                    GGACGA GGGU   GGACUCU  GAUUGGACACU    U
AAGACUACUUAUACUCCAGC^     U    CCU       CU           GUCC 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-10-P3r1_5p
mirBase accessionNone
Sequence 
0- UCCCUGAGACCCUAACUUGUGA -22
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Star sequence

Csc-Mir-10-P3r1_3p*
mirBase accessionNone
Sequence 
34- ACAGGUUAGUCUCUCAGGUCCU -56
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