MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-10-P2r2

Family name MIR-10 (all species)
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-10-P1q1-v1  Csc-Mir-10-P1q2-v1  Csc-Mir-10-P1q3-v1  Csc-Mir-10-P1r  Csc-Mir-10-P2r1  Csc-Mir-10-P3r1  Csc-Mir-10-P3r2  Csc-Mir-10-P4q  Csc-Mir-10-P4r 
Orthologues Aae-Mir-10-P2  Adi-Mir-10  Aga-Mir-10-P2  Agr-Mir-10-P2  Asp-Mir-10  Bfl-Mir-10-P2-v1  Bge-Mir-10-P2  Bko-Mir-10-P2  Bla-Mir-10-P2-v1  Bpl-Mir-10-P2  Cbr-Mir-10-P2  Cel-Mir-10-P2  Cin-Mir-10-P2  Cte-Mir-10-P2  Dan-Mir-10-P2  Dgr-Mir-10-P2  Dlo-Mir-10-P2  Dma-Mir-10-P2  Dme-Mir-10-P2  Dmo-Mir-10-P2  Dpu-Mir-10-P2  Dsi-Mir-10-P2  Dya-Mir-10-P2  Eba-Mir-10-P2  Gpa-Mir-10-P2  Gsp-Mir-10-P2  Hru-Mir-10-P2  Isc-Mir-10-P2  Lan-Mir-10-P2  Lgi-Mir-10-P2  Lhy-Mir-10-P2  Llo-Mir-10-P2  Mgi-Mir-10-P2  Mom-Mir-10-P2  Npo-Mir-10-P2  Nve-Mir-10  Obi-Mir-10-P2  Ofu-Mir-10-P2  Ovu-Mir-10-P2  Pau-Mir-10-P2  Pca-Mir-10-P2  Pdu-Mir-10-P2  Pfl-Mir-10-P2  Ple-Mir-10-P2  Pmi-Mir-10-P2  Pve-Mir-10-P2  Rph-Mir-10-P2  Sko-Mir-10-P2  Snu-Mir-10-P2  Tca-Mir-10-P2  Tur-Mir-10-P2  Xbo-Mir-10-P2  Xbo-Mir-10-P2-as 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Eumetazoa
Genome context
(GCF_000671375.1_CSC)		 NW_019384344.1: 385704-385766 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-10-P2r2)		 Mir-10-P2r2 NW_019384344.1: 385704-385766 [+] Ensembl
Let-7-P18b NW_019384344.1: 386477-386544 [+] Ensembl
Mir-10-P2r1 NW_019384344.1: 388111-388173 [+] Ensembl
Let-7-P18a NW_019384344.1: 388884-388951 [+] Ensembl
Mir-10-P3r2 NW_019384344.1: 391437-391492 [+] Ensembl
Mir-10-P3r1 NW_019384344.1: 397903-397958 [+] Ensembl
Seed ACCCGUA
Precursor
(pre-Mir +30nt flank)		 
UGCCUCUGACAUCAGUUGCCAUCACGCCUUAACCCGUAGAUCCGAACUUGUGUUGUUAAAUAGUCUAACCACAAGGUCGAUUCUAUGGGUCCAGGUUGGAUGGAUAAUUACGAACGAAUCUUC
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Structure
        10          20        30        40        50        60 
UGCCUCUGACAUCAGUUG--|    AC    UA         UC   A      UUGUUAAA 
                    CCAUC  GCCU  ACCCGUAGA  CGA CUUGUG        \
                    GGUAG  UGGA  UGGGUAUCU  GCU GAACAC        U
CUUCUAAGCAAGCAUUAAUA^    GU    CC         UA   G      CAAUCUGA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
- +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-10-P2r2_5p
mirBase accessionNone
Sequence 
0- AACCCGUAGAUCCGAACUUGUG -22
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Star sequence

Csc-Mir-10-P2r2_3p*
mirBase accessionNone
Sequence 
41- CAAGGUCGAUUCUAUGGGUCCA -63
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