MirGeneDB 3.0
46 Gyrodactylus salaris microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC To
Gsa-Novel-1 None GSA-NOVEL-1 AAGAUGG None None scf7180006950188 19757 19956 + G. salaris G. salaris No 1
Gsa-Mir-9398 gsa-mir-9398 MIR-9398 UUAGAUU MIMAT0035342 MIMAT0035343 scf7180006949395 12153 12222 + G. salaris G. salaris No 1
Gsa-Mir-9397 gsa-mir-9397 MIR-9397 GAUGUAU MIMAT0035340 MIMAT0035341 scf7180006950538 29715 29789 + G. salaris G. salaris No
Gsa-Mir-9395 gsa-mir-9395 MIR-9395 UCUUGAU MIMAT0035336 MIMAT0035337 scf7180006952959 457 517 - G. salaris G. salaris No 1
Gsa-Mir-9391 gsa-mir-9391 MIR-9391 UCCAUGU MIMAT0035326 MIMAT0035327 scf7180006953254 15392 15469 - G. salaris G. salaris No
Gsa-Mir-2160 gsa-mir-9389 MIR-2160 GGCGCUU MIMAT0035318 MIMAT0035319 scf7180006951498 7116 7189 - Platyhelminthes Platyhelminthes No 1 1
Gsa-Mir-2001 gsa-mir-2001 MIR-2001 UGUGACC MIMAT0035280 MIMAT0035281 scf7180006951744 4739 4810 + Bilateria Bilateria No 1
Gsa-Mir-1993 gsa-mir-1993 MIR-1993 AUUAUGC MIMAT0035300 MIMAT0035301 scf7180006952422 6312 6376 + Protostomia Protostomia No
Gsa-Mir-1992 gsa-mir-1992 MIR-1992 CAGCAGU MIMAT0035312 MIMAT0035313 scf7180006949739 1940 2002 - Platytrochozoa Platytrochozoa No
Gsa-Mir-1175 gsa-mir-1175 MIR-1175 GAGAUUC MIMAT0035254 MIMAT0035255 scf7180006953312 24740 24805 + Protostomia Protostomia No 1
Gsa-Mir-281 gsa-mir-281 MIR-281 GUCAUGG MIMAT0035268 MIMAT0035269 scf7180006949467 25192 25257 - Nephrozoa Nephrozoa No 1
Gsa-Mir-279 gsa-mir-279 MIR-279 GACUAGA MIMAT0035244 MIMAT0035245 scf7180006951690 7131 7187 + Protostomia Protostomia No 1
Gsa-Mir-278 gsa-mir-278 MIR-278 UCGGUGG MIMAT0035294 MIMAT0035295 scf7180006947158 2473 2533 + Bilateria Bilateria No 1
Gsa-Mir-277-P9 gsa-mir-277b MIR-277 AAAUGCA MIMAT0035310 MIMAT0035311 scf7180006952241 4154 4223 - Neodermata Protostomia No 1 1
Gsa-Mir-277-P8 gsa-mir-277a MIR-277 AAAUGCA MIMAT0035296 MIMAT0035297 scf7180006947706 6212 6270 + Tricladida + Neodermata Protostomia No 1
Gsa-Mir-219 gsa-mir-219 MIR-219 GAUUGUC MIMAT0035264 MIMAT0035265 scf7180006949674 6907 6977 - Bilateria Bilateria No 1
Gsa-Mir-190 gsa-mir-190 MIR-190 GAUAUGU MIMAT0035252 MIMAT0035253 scf7180006948403 28534 28608 + Bilateria Bilateria No 1 1
Gsa-Mir-184 gsa-mir-184a MIR-184 GGACGGA MIMAT0035248 MIMAT0035249 scf7180006948913 11550 11629 - Nephrozoa Nephrozoa No 1
Gsa-Mir-153 gsa-mir-153 MIR-153 CUGCUUG MIMAT0035316 MIMAT0035317 scf7180006952706 19354 19411 - Bilateria Bilateria Unknown 1
Gsa-Mir-124-o7 gsa-mir-124b MIR-124 UGUUUAC MIMAT0035292 MIMAT0035293 scf7180006948575 4057 4113 - G. salaris Bilateria No 1
Gsa-Mir-124-o6 gsa-mir-124a MIR-124 AAGGCAC MIMAT0035274 MIMAT0035275 scf7180006948914 6447 6516 - G. salaris Bilateria No 1 1
Gsa-Mir-96-P1z gsa-mir-96b MIR-96 UUGGCAC MIMAT0035270 MIMAT0035271 scf7180006953022 74128 74183 - G. salaris Bilateria No 1
Gsa-Mir-96-P1y gsa-mir-96a MIR-96 UUGGCAC MIMAT0035256 MIMAT0035257 scf7180006952513 23990 24062 + G. salaris Bilateria No 1 1
Gsa-Mir-87-o42 gsa-mir-87 MIR-87 UGAGCAA MIMAT0035242 MIMAT0035243 scf7180006949880 3080 3200 + G. salaris Protostomia No 1
Gsa-Mir-76 gsa-mir-76a MIR-76 UCGUUGU MIMAT0035286 MIMAT0035287 scf7180006950880 2392 2454 + Nephrozoa Nephrozoa No 1
Gsa-Mir-71-o8 gsa-mir-71b MIR-71 GAAAGAC MIMAT0035250 MIMAT0035251 scf7180006953439 69489 69543 - G. salaris Nephrozoa No 1
Gsa-Mir-71-o7 gsa-mir-71a MIR-71 GAAAGAC MIMAT0035246 MIMAT0035247 scf7180006951238 7887 7948 + G. salaris Nephrozoa No 1
Gsa-Mir-67 gsa-mir-67 MIR-67 CACAACC MIMAT0035262 MIMAT0035263 scf7180006949532 22977 23036 - Protostomia Protostomia No 1
Gsa-Mir-36-o39 gsa-mir-36 MIR-36 CACCGGG MIMAT0035258 MIMAT0035259 scf7180006952682 32348 32411 - G. salaris Protostomia No 1
Gsa-Mir-36-o38 None MIR-36 CACCGGG None None scf7180006952682 33007 33101 - G. salaris Protostomia No
Gsa-Mir-31 gsa-mir-31 MIR-31 GCUAUAC MIMAT0035314 MIMAT0035315 scf7180006949480 25240 25295 - Bilateria Bilateria No 1
Gsa-Mir-22-P1 None MIR-22 GCUGCCU None None scf7180006950278 13180 13275 - Bilateria Bilateria No 1
Gsa-Mir-10-P4 gsa-mir-993 MIR-10 UCUGUAU MIMAT0035304 MIMAT0035305 scf7180006950686 1088 1147 - Protostomia Eumetazoa No 1
Gsa-Mir-10-P3 gsa-lin-4 MIR-10 CCCUGAG MIMAT0035306 MIMAT0035307 scf7180006948395 10358 10418 - Bilateria Eumetazoa No 1
Gsa-Mir-10-P1o7 gsa-mir-10b MIR-10 ACCCUGU MIMAT0035308 MIMAT0035309 scf7180006950194 9064 9123 + G. salaris Eumetazoa No
Gsa-Mir-10-P1o6 gsa-mir-10a MIR-10 AAUUCGA MIMAT0035278 MIMAT0035279 scf7180006950305 2713 2769 - G. salaris Eumetazoa No 1
Gsa-Mir-9 gsa-mir-9 MIR-9 CUUUGGU MIMAT0035288 MIMAT0035289 scf7180006949357 9043 9143 + Bilateria Bilateria No 1 1
Gsa-Mir-8 gsa-mir-8 MIR-8 AAUACUG MIMAT0035284 MIMAT0035285 scf7180006948689 2700 2759 + Nephrozoa Nephrozoa No 1
Gsa-Mir-7 gsa-mir-7 MIR-7 GGAAGAC MIMAT0035282 MIMAT0035283 scf7180006952849 5856 5933 + Bilateria Bilateria No 1
Gsa-Mir-2-o163 gsa-mir-2b MIR-2 AUCACAG MIMAT0035272 MIMAT0035273 scf7180006953439 69381 69446 - G. salaris Protostomia No
Gsa-Mir-2-o162 gsa-mir-2d MIR-2 CCCUUGC MIMAT0035298 MIMAT0035299 scf7180006951238 8224 8285 + G. salaris Protostomia No 1 1
Gsa-Mir-2-o161b gsa-mir-2a MIR-2 AUCACAG MIMAT0035266 MIMAT0035267 scf7180006951238 8098 8159 + G. salaris Protostomia No 1
Gsa-Mir-2-o161a gsa-mir-2a MIR-2 AUCACAG MIMAT0035266 MIMAT0035267 scf7180006951238 8098 8159 + G. salaris Protostomia No 1
Gsa-Mir-1 gsa-mir-1 MIR-1 GGAAUGU MIMAT0035240 MIMAT0035241 scf7180006947477 9299 9394 + Bilateria Bilateria No 1
Gsa-Let-7 gsa-let-7 LET-7 GAGGUAG MIMAT0035260 MIMAT0035261 scf7180006952612 3495 3577 + Bilateria Bilateria No 1 1
Gsa-Bantam gsa-bantam BANTAM GAGAUCA MIMAT0035290 MIMAT0035291 scf7180006948641 4769 4854 + Protostomia Protostomia No 1 1

(red - mature/co-mature, blue - star)

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