Mir-124-o7

MirGeneDB ID

Gsa-Mir-124-o7

Family name

MIR-124 (all species)

Species

Russian doll killer (Gyrodactylus salaris)

MiRBase ID

gsa-mir-124b

Paralogues

Gsa-Mir-124-o6

Orthologues

Aae-Mir-124 Aga-Mir-124 Agr-Mir-124 Asu-Mir-124 Bfl-Mir-124 Bge-Mir-124 Bko-Mir-124 Bla-Mir-124 Bpl-Mir-124 Cel-Mir-124 Cin-Mir-124-P7 Cte-Mir-124 Dan-Mir-124 Dlo-Mir-124 Dma-Mir-124 Dme-Mir-124 Dmo-Mir-124 Dpu-Mir-124 Dsi-Mir-124 Dya-Mir-124 Eba-Mir-124 Esc-Mir-124 Gpa-Mir-124 Gsp-Mir-124 Hme-Mir-124 Hru-Mir-124 Isc-Mir-124 Lan-Mir-124 Lhy-Mir-124 Llo-Mir-124 Mgi-Mir-124 Mom-Mir-124 Npo-Mir-124 Obi-Mir-124 Ofu-Mir-124 Ovu-Mir-124 Pau-Mir-124 Pdu-Mir-124 Pfl-Mir-124 Pmi-Mir-124 Pve-Mir-124 Sko-Mir-124 Sma-Mir-124 Sne-Mir-124 Snu-Mir-124 Spu-Mir-124 Sro-Mir-124 Tca-Mir-124 War-Mir-124 Xbo-Mir-124

Node of Origin (locus)

G. salaris

Node of Origin (family)

Bilateria

Genome context
(gyrodactylus_salaris.PRJNA244375.WBPS19.genomic)

scf7180006948575: 4057-4113 [-] UCSC Ensembl

Seed

UGUUUAC

Precursor
(pre-Mir +30nt flank)

AAAUCAUCAGUGAUAAUUCUGCAAUAACUGGUGUUUACCGUGGGGUCUUGAUUUGGUUGUAUUUAUUAAGGCACGCGGUGAAUAUCAAUAUUUAGAAUCAUACUACGGAUGUACUAC

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Structure

        10            20        30        40        50        
AAAUCAUCAGUGAUAAU----|   C    AC              GG        UUGGU 
                     UCUG AAUA  UGGUGUUUACCGUG  GUCUUGAU     U
                     AGAU UUAU  ACUAUAAGUGGCGC  CGGAAUUA     G
CAUCAUGUAGGCAUCAUACUA^   -    A-              A-        UUUAU 
     110       100         90         80         70        60

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

To

Mature sequence

Gsa-Mir-124-o7_5p

mirBase accession

MIMAT0035292

Sequence

0- GUGUUUACCGUGGGGUCUUGAU -22

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Star sequence

Gsa-Mir-124-o7_3p*

mirBase accession

MIMAT0035293

Sequence

36- UAAGGCACGCGGUGAAUAUCA -57

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