MirGeneDB 3.0

20 microRNA genes with node of origin G. salaris
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Gsa-Mir-2-o161a gsa-mir-2a MIR-2 AUCACAG MIMAT0035266 MIMAT0035267 scf7180006951238 8098 8159 + G. salaris Protostomia No 1
Gsa-Mir-2-o161b gsa-mir-2a MIR-2 AUCACAG MIMAT0035266 MIMAT0035267 scf7180006951238 8098 8159 + G. salaris Protostomia No 1
Gsa-Mir-2-o162 gsa-mir-2d MIR-2 CCCUUGC MIMAT0035298 MIMAT0035299 scf7180006951238 8224 8285 + G. salaris Protostomia No 1 1
Gsa-Mir-2-o163 gsa-mir-2b MIR-2 AUCACAG MIMAT0035272 MIMAT0035273 scf7180006953439 69381 69446 - G. salaris Protostomia No
Gsa-Mir-10-P1o6 gsa-mir-10a MIR-10 AAUUCGA MIMAT0035278 MIMAT0035279 scf7180006950305 2713 2769 - G. salaris Eumetazoa No 1
Gsa-Mir-10-P1o7 gsa-mir-10b MIR-10 ACCCUGU MIMAT0035308 MIMAT0035309 scf7180006950194 9064 9123 + G. salaris Eumetazoa No
Gsa-Mir-36-o38 None MIR-36 CACCGGG None None scf7180006952682 33007 33101 - G. salaris Protostomia No
Gsa-Mir-36-o39 gsa-mir-36 MIR-36 CACCGGG MIMAT0035258 MIMAT0035259 scf7180006952682 32348 32411 - G. salaris Protostomia No 1
Gsa-Mir-71-o7 gsa-mir-71a MIR-71 GAAAGAC MIMAT0035246 MIMAT0035247 scf7180006951238 7887 7948 + G. salaris Nephrozoa No 1
Gsa-Mir-71-o8 gsa-mir-71b MIR-71 GAAAGAC MIMAT0035250 MIMAT0035251 scf7180006953439 69489 69543 - G. salaris Nephrozoa No 1
Gsa-Mir-87-o42 gsa-mir-87 MIR-87 UGAGCAA MIMAT0035242 MIMAT0035243 scf7180006949880 3080 3200 + G. salaris Protostomia No 1
Gsa-Mir-96-P1y gsa-mir-96a MIR-96 UUGGCAC MIMAT0035256 MIMAT0035257 scf7180006952513 23990 24062 + G. salaris Bilateria No 1 1
Gsa-Mir-96-P1z gsa-mir-96b MIR-96 UUGGCAC MIMAT0035270 MIMAT0035271 scf7180006953022 74128 74183 - G. salaris Bilateria No 1
Gsa-Mir-124-o6 gsa-mir-124a MIR-124 AAGGCAC MIMAT0035274 MIMAT0035275 scf7180006948914 6447 6516 - G. salaris Bilateria No 1 1
Gsa-Mir-124-o7 gsa-mir-124b MIR-124 UGUUUAC MIMAT0035292 MIMAT0035293 scf7180006948575 4057 4113 - G. salaris Bilateria No 1
Gsa-Mir-9391 gsa-mir-9391 MIR-9391 UCCAUGU MIMAT0035326 MIMAT0035327 scf7180006953254 15392 15469 - G. salaris G. salaris No
Gsa-Mir-9395 gsa-mir-9395 MIR-9395 UCUUGAU MIMAT0035336 MIMAT0035337 scf7180006952959 457 517 - G. salaris G. salaris No 1
Gsa-Mir-9397 gsa-mir-9397 MIR-9397 GAUGUAU MIMAT0035340 MIMAT0035341 scf7180006950538 29715 29789 + G. salaris G. salaris No
Gsa-Mir-9398 gsa-mir-9398 MIR-9398 UUAGAUU MIMAT0035342 MIMAT0035343 scf7180006949395 12153 12222 + G. salaris G. salaris No 1
Gsa-Novel-1 None GSA-NOVEL-1 AAGAUGG None None scf7180006950188 19757 19956 + G. salaris G. salaris No 1

(red - mature/co-mature, blue - star)

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