MirGeneDB 3.0

35 microRNA genes with seed UGCGUAG
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Sne-Novel-10 None SNE-NOVEL-10 UGCGUAG None None k141_3266 4354 4450 + S. nebaliae S. nebaliae No 1
Ava-Mir-242-P10 None MIR-242 UGCGUAG None None CP075492.1 7934575 7934649 + A. vaga Nephrozoa Unknown 1 1
Ava-Mir-242-P9 None MIR-242 UGCGUAG None None CP075497.1 8451995 8452069 - A. vaga Nephrozoa No 1
Nag-Mir-242-P8 None MIR-242 UGCGUAG None None k149_2538 1655 1711 - N.agilis Nephrozoa No
Nag-Mir-242-P7 None MIR-242 UGCGUAG None None k149_10908 19517 19574 + N.agilis Nephrozoa No
Pve-Mir-242-P6 None MIR-242 UGCGUAG None None Pve_Chr9 281369414 281369471 + Dentaliidae Nephrozoa Unknown
Pve-Mir-242-P5 None MIR-242 UGCGUAG None None Pve_Chr9 281370893 281370948 + Dentaliidae Nephrozoa Unknown 1
Pdu-Mir-242-P4d None MIR-242 UGCGUAG None None JAPTHN010000007.1 29836784 29836846 + P. dumerilii Nephrozoa No 1
Pdu-Mir-242-P4c None MIR-242 UGCGUAG None None JAPTHN010000007.1 29827092 29827154 + P. dumerilii Nephrozoa No 1
Pdu-Mir-242-P4b None MIR-242 UGCGUAG None None JAPTHN010000007.1 29826777 29826839 + P. dumerilii Nephrozoa No 1
Pdu-Mir-242-P4a None MIR-242 UGCGUAG None None JAPTHN010000007.1 29826411 29826473 + P. dumerilii Nephrozoa No
Hru-Mir-242-P3b None MIR-242 UGCGUAG None None JALGQA010000016.1 16931077 16931132 - H. rufescens Nephrozoa Unknown 1 1 1
Hru-Mir-242-P3a None MIR-242 UGCGUAG None None JALGQA010000016.1 16932597 16932652 - H. rufescens Nephrozoa Unknown 1 1 1
Lgi-Mir-242-P2 lgi-mir-242a MIR-242 UGCGUAG MIMAT0009590 None LOTGIsca_16 1142666 1142720 - L. gigantea Nephrozoa Unknown 1
Lgi-Mir-242-P1 lgi-mir-242b MIR-242 UGCGUAG MIMAT0009681 None LOTGIsca_16 1142985 1143041 - L. gigantea Nephrozoa Unknown
War-Mir-242 None MIR-242 UGCGUAG None None WNLI01179040.1 349 410 + Nephrozoa Nephrozoa Unknown 1 1
Spu-Mir-242 spu-mir-242 MIR-242 UGCGUAG MIMAT0009647 None AAGJ06000857.1 1093867 1093927 - Nephrozoa Nephrozoa No
Snu-Mir-242 None MIR-242 UGCGUAG None None CM049306.1 6216699 6216755 - Nephrozoa Nephrozoa Unknown 1
Rph-Mir-242 None MIR-242 UGCGUAG None None CM018527.1 22888371 22888428 - Nephrozoa Nephrozoa Unknown
Pmi-Mir-242 pmi-mir-242 MIR-242 UGCGUAG MIMAT0032169 None JH788435.1 1558 1620 + Nephrozoa Nephrozoa No 1
Pca-Mir-242 None MIR-242 UGCGUAG None None AXZU02061064.1 392 448 + Nephrozoa Nephrozoa Unknown 1
Pau-Mir-242 None MIR-242 UGCGUAG None None NMRA01000005.1 1372726 1372781 + Nephrozoa Nephrozoa Unknown 1
Ofu-Mir-242 None MIR-242 UGCGUAG None None CAIIXF020000005.1 7432639 7432697 + Nephrozoa Nephrozoa Unknown
Npo-Mir-242 None MIR-242 UGCGUAG None None JACATO010000680.1 783878 783934 - Nephrozoa Nephrozoa Unknown 1
Mom-Mir-242 None MIR-242 UGCGUAG None None JARFOD010132518.1 5112 5170 + Nephrozoa Nephrozoa Unknown
Mgi-Mir-242 None MIR-242 UGCGUAG None None scaffold507 280160 280218 + Nephrozoa Nephrozoa No 1
Lhy-Mir-242 None MIR-242 UGCGUAG None None scaffold173914_17.5 861 918 - Nephrozoa Nephrozoa Unknown 1
Lan-Mir-242 None MIR-242 UGCGUAG None None LFEI01001408 48107 48163 + Nephrozoa Nephrozoa Unknown 1
Eba-Mir-242 None MIR-242 UGCGUAG None None WURV02166278.1 1095 1153 + Nephrozoa Nephrozoa Unknown 1
Cte-Mir-242 cte-mir-242 MIR-242 UGCGUAG MIMAT0009680 None CAPTEscaffold_453 18518 18578 - Nephrozoa Nephrozoa No 1
Cel-Mir-242 cel-mir-242 MIR-242 UGCGUAG MIMAT0000298 None chrIV 4274262 4274320 + Nephrozoa Nephrozoa No
Cbr-Mir-242 cbr-mir-242 MIR-242 UGCGUAG MIMAT0004296 None II 15031468 15031526 - Nephrozoa Nephrozoa No
Bpl-Mir-242 None MIR-242 UGCGUAG None None QEOQ01000508.1 5043559 5043655 - Nephrozoa Nephrozoa No 1 1
Bko-Mir-242 None MIR-242 UGCGUAG None None PJRA01000172.1 202468 202564 - Nephrozoa Nephrozoa No 1 1
Agr-Mir-242 None MIR-242 UGCGUAG None None JABBOT010000004.1 12479370 12479428 + Nephrozoa Nephrozoa Unknown

(red - mature/co-mature, blue - star)

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