MirGeneDB 2.1

MirGeneDB ID

Pbv-Mir-132-P1

Family name MIR-132 (all species)
Seed CCGUGGC
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-132
Paralogues Pbv-Mir-132-P2 
Orthologues Aca-Mir-132-P1  Ami-Mir-132-P1  Bta-Mir-132-P1  Cfa-Mir-132-P1  Cmi-Mir-132-P1  Cpi-Mir-132-P1  Cpo-Mir-132-P1  Dno-Mir-132-P1  Dre-Mir-132-P1a  Dre-Mir-132-P1b  Ebu-Mir-132-P1e  Ebu-Mir-132-P1f  Ete-Mir-132-P1  Gga-Mir-132-P1  Gja-Mir-132-P1  Gmo-Mir-132-P1a  Gmo-Mir-132-P1b  Hsa-Mir-132-P1  Lch-Mir-132-P1  Loc-Mir-132-P1  Mal-Mir-132-P1a  Mal-Mir-132-P1b  Mdo-Mir-132-P1  Mml-Mir-132-P1  Mmu-Mir-132-P1  Mun-Mir-132-P1  Oan-Mir-132-P1  Ocu-Mir-132-P1  Pma-Mir-132-o1  Rno-Mir-132-P1  Sha-Mir-132-P1  Spt-Mir-132-P1  Sto-Mir-132-P1  Tgu-Mir-132-P1  Tni-Mir-132-P1a  Tni-Mir-132-P1b  Xla-Mir-132-P1c  Xla-Mir-132-P1d  Xtr-Mir-132-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE962683.1: 6392-6452 [-]
Clustered miRNAs
(< 50kb from Mir-132-P1)
Mir-132-P1 KE962683.1: 6392-6452 [-]
Mir-132-P2 KE962683.1: 12397-12464 [-]
Precursor
(pre-Mir +30nt flank)
UGUGCCAGCUCAUCCUGCGUCUCCAGGGCAACCGUGGCUUUAGAUUGUUACUGUGUGGAUGUGGGCUGGUAACAGUCUACAGCCAUGGUUGCCUGGAGUGGACGCCAAAGCAUCGGCCAAG
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Structure
        10            20        30        40        50          
UGUGCCAGCUCAUCCUG----| U       G           U            GUGUGGA 
                     CG CUCCAGG CAACCGUGGCU UAGAUUGUUACU       \
                     GU GAGGUCC GUUGGUACCGA AUCUGACAAUGG       U
GAACCGGCUACGAAACCGCAG^ -       -           C            UCGGGUG 
 .       110       100          90        80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
To
Mature sequence

Pbv-Mir-132-P1_5p

mirBase accessionMIMAT0038933
Sequence
0- ACCGUGGCUUUAGAUUGUUACU -22
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Co-mature sequence

Pbv-Mir-132-P1_3p

mirBase accessionMIMAT0038934
Sequence
39- UAACAGUCUACAGCCAUGGUUG -61
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