MirGeneDB 2.1

MirGeneDB ID

Ebu-Mir-132-P1e

Family name MIR-132 (all species)
Seed AACAGUC
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-132-P1f 
Orthologues Aca-Mir-132-P1  Ami-Mir-132-P1  Bta-Mir-132-P1  Cfa-Mir-132-P1  Cmi-Mir-132-P1  Cpi-Mir-132-P1  Cpo-Mir-132-P1  Dno-Mir-132-P1  Ete-Mir-132-P1  Gga-Mir-132-P1  Gja-Mir-132-P1  Hsa-Mir-132-P1  Lch-Mir-132-P1  Loc-Mir-132-P1  Mdo-Mir-132-P1  Mml-Mir-132-P1  Mmu-Mir-132-P1  Mun-Mir-132-P1  Oan-Mir-132-P1  Ocu-Mir-132-P1  Pbv-Mir-132-P1  Pma-Mir-132-o1  Rno-Mir-132-P1  Sha-Mir-132-P1  Spt-Mir-132-P1  Sto-Mir-132-P1  Tgu-Mir-132-P1  Xtr-Mir-132-P1 
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)
FYBX02010190.1: 7403080-7403142 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAGUGCCAACAGCCCUUGGGGUCAUGGUACCCGUGGCUAUAGACUGUUACUGCACUAUAUAGUUGUCAGGUAACAGUCUACAGCCAUGGUUGCUAUGGCAACUAUACCUGCAGCUUGGACCG
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Structure
        10        20          30        40        50        60 
CAAGUGCCAACAGCCCUUGGG--|        C        A            GCACUAUA 
                       GUCAUGGUA CCGUGGCU UAGACUGUUACU        \
                       CGGUAUCGU GGUACCGA AUCUGACAAUGG        U
GCCAGGUUCGACGUCCAUAUCAA^        U        C            ACUGUUGA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Ebu-Mir-132-P1e_5p*

mirBase accessionNone
Sequence
0- CCCGUGGCUAUAGACUGUUACU -22
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Mature sequence

Ebu-Mir-132-P1e_3p

mirBase accessionNone
Sequence
41- UAACAGUCUACAGCCAUGGUUG -63
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