MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-132-P1

Family name MIR-132 (all species)
Seed AACAGUC
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-132
Paralogues Mdo-Mir-132-P2 
Orthologues Aca-Mir-132-P1  Ami-Mir-132-P1  Bta-Mir-132-P1  Cfa-Mir-132-P1  Cmi-Mir-132-P1  Cpi-Mir-132-P1  Cpo-Mir-132-P1  Dno-Mir-132-P1  Dre-Mir-132-P1a  Dre-Mir-132-P1b  Ebu-Mir-132-P1e  Ebu-Mir-132-P1f  Ete-Mir-132-P1  Gga-Mir-132-P1  Gja-Mir-132-P1  Gmo-Mir-132-P1a  Gmo-Mir-132-P1b  Hsa-Mir-132-P1  Lch-Mir-132-P1  Loc-Mir-132-P1  Mal-Mir-132-P1a  Mal-Mir-132-P1b  Mml-Mir-132-P1  Mmu-Mir-132-P1  Mun-Mir-132-P1  Oan-Mir-132-P1  Ocu-Mir-132-P1  Pbv-Mir-132-P1  Pma-Mir-132-o1  Rno-Mir-132-P1  Sha-Mir-132-P1  Spt-Mir-132-P1  Sto-Mir-132-P1  Tgu-Mir-132-P1  Tni-Mir-132-P1a  Tni-Mir-132-P1b  Xla-Mir-132-P1c  Xla-Mir-132-P1d  Xtr-Mir-132-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)
2: 517586552-517586609 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-132-P1)
Mir-132-P1 2: 517586552-517586609 [-] UCSC Ensembl
Mir-132-P2 2: 517587377-517587438 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCCCCACCCGCCCCCGCGUCUCCAGGGCAACCGUGGCUUUCGAUUGUUACUGUGGGAACCAGGGGUAACAGUCUACAGCCAUGGUCGCCCCGCAGCACGCCCACGCGGCUGUUCCUC
Get precursor sequence
Structure
        10         20         30        40        50        
CCCCCCACCCGCCCCCG-   -| CCA    A         UUC          GUGGG 
                  CGU CU   GGGC ACCGUGGCU   GAUUGUUACU     A
                  GCA GA   CCCG UGGUACCGA   CUGACAAUGG     A
CUCCUUGUCGGCGCACCC   C^ CGC    C         CAU          GGACC 
      110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Drosha cut -1 relative to what is annotated here and this cut is a likely Group 2 miRNA.
3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-132-P1_5p*

mirBase accessionMIMAT0026693
Sequence
0- ACCGUGGCUUUCGAUUGUUACU -22
Get sequence
Proposed targets TargetScanVert: mdo-miR-132-5p
Mature sequence

Mdo-Mir-132-P1_3p

mirBase accessionMIMAT0004149
Sequence
36- UAACAGUCUACAGCCAUGGUCG -58
Get sequence
Proposed targets TargetScanVert: mdo-miR-132-3p