MirGeneDB 2.1

MirGeneDB ID

Sto-Mir-132-P1

Family name MIR-132 (all species)
Seed AACAGUC
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues
Orthologues Aca-Mir-132-P1  Ami-Mir-132-P1  Bta-Mir-132-P1  Cfa-Mir-132-P1  Cmi-Mir-132-P1  Cpi-Mir-132-P1  Cpo-Mir-132-P1  Dno-Mir-132-P1  Dre-Mir-132-P1a  Dre-Mir-132-P1b  Ebu-Mir-132-P1e  Ebu-Mir-132-P1f  Ete-Mir-132-P1  Gga-Mir-132-P1  Gja-Mir-132-P1  Gmo-Mir-132-P1a  Gmo-Mir-132-P1b  Hsa-Mir-132-P1  Lch-Mir-132-P1  Loc-Mir-132-P1  Mal-Mir-132-P1a  Mal-Mir-132-P1b  Mdo-Mir-132-P1  Mml-Mir-132-P1  Mmu-Mir-132-P1  Mun-Mir-132-P1  Oan-Mir-132-P1  Ocu-Mir-132-P1  Pbv-Mir-132-P1  Pma-Mir-132-o1  Rno-Mir-132-P1  Sha-Mir-132-P1  Spt-Mir-132-P1  Tgu-Mir-132-P1  Tni-Mir-132-P1a  Tni-Mir-132-P1b  Xla-Mir-132-P1c  Xla-Mir-132-P1d  Xtr-Mir-132-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)
BFAA01048146.1: 2534-2593 [-]
Precursor
(pre-Mir +30nt flank)
GCUGUGGGGCUGAGCCCUGGUUCCACGGUGACCGUGGCUUUAGAUUGUUACUGUUAAUCUAACCUUAGUAACAGUCUACAGCCAUGGUCGCUGGGGCCGGGAGUCACAUACAUCCCACCA
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Structure
        10            20        30        40        50         
GCUGUGGGGCUGAGCCC----|       CG            U            GUUAAU 
                     UGGUUCCA  GUGACCGUGGCU UAGAUUGUUACU      C
                     GCCGGGGU  CGCUGGUACCGA AUCUGACAAUGA      U
ACCACCCUACAUACACUGAGG^       --            C            UUCCAA 
.       110       100          90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Sto-Mir-132-P1_5p*

mirBase accessionNone
Sequence
0- ACCGUGGCUUUAGAUUGUUACU -22
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Mature sequence

Sto-Mir-132-P1_3p

mirBase accessionNone
Sequence
38- UAACAGUCUACAGCCAUGGUCG -60
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