Mir-26-P1

MirGeneDB ID

Hsa-Mir-26-P1

Family name

MIR-26 (all species)

Seed

UCAAGUA

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-26a-1

Paralogues

Hsa-Mir-26-P2 Hsa-Mir-26-P4

Orthologues

Aca-Mir-26-P1 Ami-Mir-26-P1 Bta-Mir-26-P1 Cfa-Mir-26-P1 Cli-Mir-26-P1 Cmi-Mir-26-P1 Cpi-Mir-26-P1 Cpo-Mir-26-P1 Dno-Mir-26-P1 Dre-Mir-26-P1a Dre-Mir-26-P1b Ete-Mir-26-P1 Gga-Mir-26-P1 Gja-Mir-26-P1 Gmo-Mir-26-P1a Gmo-Mir-26-P1b Lch-Mir-26-P1 Loc-Mir-26-P1 Mal-Mir-26-P1a Mal-Mir-26-P1b Mdo-Mir-26-P1 Mml-Mir-26-P1 Mmu-Mir-26-P1 Mun-Mir-26-P1 Oan-Mir-26-P1 Ocu-Mir-26-P1 Pbv-Mir-26-P1 Pma-Mir-26-o1 Rno-Mir-26-P1 Sha-Mir-26-P1 Spt-Mir-26-P1 Sto-Mir-26-P1 Tgu-Mir-26-P1 Tni-Mir-26-P1a Tni-Mir-26-P1b Xla-Mir-26-P1c Xla-Mir-26-P1d Xtr-Mir-26-P1

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr3: 37969413-37969473 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

ACCAAGGCCCUGGCGAAGGCCGUGGCCUCGUUCAAGUAAUCCAGGAUAGGCUGUGCAGGUCCCAAUGGGCCUAUUCUUGGUUACUUGCACGGGGACGCGGGCCUGGACGCCGGCAUCCGGG

Get precursor sequence

Structure

        10          20        30        40        50          
ACCAAGGCCCUGGCGAA-  -|    G      U         C          GUGCAGG 
                  GG CCGUG CCUCGU CAAGUAAUC AGGAUAGGCU       \
                  CC GGCGC GGGGCA GUUCAUUGG UCUUAUCCGG       U
GGGCCUACGGCCGCAGGU  G^    A      C         U          GUAACCC 
 .       110       100        90        80        70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Mature sequence

Hsa-Mir-26-P1_5p

mirBase accession

MIMAT0000082

Sequence

0- UUCAAGUAAUCCAGGAUAGGCU -22

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Proposed targets

microrna.org: MIMAT0000082
TargetScanVert: hsa-miR-26a-5p
TargetMiner: hsa-miR-26a-5p
miRDB: MIMAT0000082

Star sequence

Hsa-Mir-26-P1_3p*

mirBase accession

MIMAT0004499

Sequence

39- CCUAUUCUUGGUUACUUGCACG -61

Get sequence

Proposed targets

microrna.org: MIMAT0004499
TargetScanVert: hsa-miR-26a-1-3p
TargetMiner: hsa-miR-26a-1-3p
miRDB: MIMAT0004499