Mir-26-P1

MirGeneDB ID

Hsa-Mir-26-P1

Family name

MIR-26 (all species)

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-26a-1

Paralogues

Hsa-Mir-26-P2 Hsa-Mir-26-P4

Orthologues

Aca-Mir-26-P1 Ami-Mir-26-P1 Bta-Mir-26-P1 Cfa-Mir-26-P1 Cja-Mir-26-P1 Cli-Mir-26-P1 Cmi-Mir-26-P1 Cpi-Mir-26-P1 Cpo-Mir-26-P1 Dno-Mir-26-P1 Dre-Mir-26-P1a Dre-Mir-26-P1b Eca-Mir-26-P1 Ete-Mir-26-P1 Gga-Mir-26-P1 Gja-Mir-26-P1 Gmo-Mir-26-P1a Gmo-Mir-26-P1b Laf-Mir-26-P1 Lch-Mir-26-P1 Loc-Mir-26-P1 Mal-Mir-26-P1a Mal-Mir-26-P1b Mdo-Mir-26-P1 Mml-Mir-26-P1 Mmr-Mir-26-P1 Mmu-Mir-26-P1 Mun-Mir-26-P1 Neu-Mir-26-P1 Oan-Mir-26-P1 Ocu-Mir-26-P1 Pab-Mir-26-P1 Pbv-Mir-26-P1 Pma-Mir-26-o1 Rno-Mir-26-P1 Sha-Mir-26-P1 Spt-Mir-26-P1 Sto-Mir-26-P1 Tgu-Mir-26-P1 Tni-Mir-26-P1a Tni-Mir-26-P1b Xla-Mir-26-P1c Xla-Mir-26-P1d Xtr-Mir-26-P1

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(hg38)

chr3: 37969413-37969473 [+] UCSC Ensembl

Seed

UCAAGUA

Precursor
(pre-Mir +30nt flank)

ACCAAGGCCCUGGCGAAGGCCGUGGCCUCGUUCAAGUAAUCCAGGAUAGGCUGUGCAGGUCCCAAUGGGCCUAUUCUUGGUUACUUGCACGGGGACGCGGGCCUGGACGCCGGCAUCCGGG

Get precursor sequence

Structure

        10          20        30        40        50          
ACCAAGGCCCUGGCGAA-  -|    G      U         C          GUGCAGG 
                  GG CCGUG CCUCGU CAAGUAAUC AGGAUAGGCU       \
                  CC GGCGC GGGGCA GUUCAUUGG UCUUAUCCGG       U
GGGCCUACGGCCGCAGGU  G^    A      C         U          GUAACCC 
 .       110       100        90        80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Mature sequence

Hsa-Mir-26-P1_5p

mirBase accession

MIMAT0000082

Sequence

0- UUCAAGUAAUCCAGGAUAGGCU -22

Get sequence

Proposed targets

microrna.org: MIMAT0000082
TargetScanVert: hsa-miR-26a-5p
TargetMiner: hsa-miR-26a-5p
miRDB: MIMAT0000082

Star sequence

Hsa-Mir-26-P1_3p*

mirBase accession

MIMAT0004499

Sequence

39- CCUAUUCUUGGUUACUUGCACG -61

Get sequence

Proposed targets

microrna.org: MIMAT0004499
TargetScanVert: hsa-miR-26a-1-3p
TargetMiner: hsa-miR-26a-1-3p
miRDB: MIMAT0004499