MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-26-P1

Family name MIR-26 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-26a-2
Paralogues Eca-Mir-26-P2  Eca-Mir-26-P4 
Orthologues Aca-Mir-26-P1  Ami-Mir-26-P1  Bta-Mir-26-P1  Cfa-Mir-26-P1  Cja-Mir-26-P1  Cli-Mir-26-P1  Cmi-Mir-26-P1  Cpi-Mir-26-P1  Cpo-Mir-26-P1  Dno-Mir-26-P1  Dre-Mir-26-P1a  Dre-Mir-26-P1b  Ete-Mir-26-P1  Gga-Mir-26-P1  Gja-Mir-26-P1  Gmo-Mir-26-P1a  Gmo-Mir-26-P1b  Hsa-Mir-26-P1  Laf-Mir-26-P1  Lch-Mir-26-P1  Loc-Mir-26-P1  Mal-Mir-26-P1a  Mal-Mir-26-P1b  Mdo-Mir-26-P1  Mml-Mir-26-P1  Mmr-Mir-26-P1  Mmu-Mir-26-P1  Mun-Mir-26-P1  Neu-Mir-26-P1  Oan-Mir-26-P1  Ocu-Mir-26-P1  Pab-Mir-26-P1  Pbv-Mir-26-P1  Pma-Mir-26-o1  Rno-Mir-26-P1  Sha-Mir-26-P1  Spt-Mir-26-P1  Sto-Mir-26-P1  Tgu-Mir-26-P1  Tni-Mir-26-P1a  Tni-Mir-26-P1b  Xla-Mir-26-P1c  Xla-Mir-26-P1d  Xtr-Mir-26-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009163.1: 48848863-48848923 [-] UCSC Ensembl
Seed UCAAGUA
Precursor
(pre-Mir +30nt flank)		 
ACCAAGGCCCUGGCGAAGGCCGUGGCCUCGUUCAAGUAAUCCAGGAUAGGCUGUGCAGGUCCCAAUGGGCCUAUUCUUGGUUACUUGCACGCGGACGCGGGCCUGGACGCCGGCAUCCGGG
Get precursor sequence
Structure
        10          20        30        40        50          
ACCAAGGCCCUGGCGAA-  -|    G  U   U         C          GUGCAGG 
                  GG CCGUG CC CGU CAAGUAAUC AGGAUAGGCU       \
                  CC GGCGC GG GCA GUUCAUUGG UCUUAUCCGG       U
GGGCCUACGGCCGCAGGU  G^    A  C   C         U          GUAACCC 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-26-P1_5p
mirBase accessionMIMAT0012975
Sequence 
0- UUCAAGUAAUCCAGGAUAGGCU -22
Get sequence
Star sequence

Eca-Mir-26-P1_3p*
mirBase accessionNone
Sequence 
39- CCUAUUCUUGGUUACUUGCACG -61
Get sequence