MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-128-P1

Family name MIR-128 (all species)
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-128-2
Paralogues Dre-Mir-128-P2a  Dre-Mir-128-P2b 
Orthologues Aca-Mir-128-P1  Ami-Mir-128-P1  Bta-Mir-128-P1  Cfa-Mir-128-P1  Cja-Mir-128-P1  Cli-Mir-128-P1  Cmi-Mir-128-P1  Cpi-Mir-128-P1  Cpo-Mir-128-P1  Dno-Mir-128-P1  Ebu-Mir-128  Eca-Mir-128-P1  Ete-Mir-128-P1  Gga-Mir-128-P1  Gja-Mir-128-P1  Gmo-Mir-128-P1  Hsa-Mir-128-P1  Laf-Mir-128-P1  Lch-Mir-128-P1  Loc-Mir-128-P1  Mal-Mir-128-P1  Mdo-Mir-128-P1  Mml-Mir-128-P1  Mmr-Mir-128-P1  Mmu-Mir-128-P1  Mun-Mir-128-P1  Neu-Mir-128-P1  Oan-Mir-128-P1  Ocu-Mir-128-P1  Pab-Mir-128-P1  Pbv-Mir-128-P1  Pma-Mir-128-o1  Rno-Mir-128-P1  Sha-Mir-128-P1  Spt-Mir-128-P1  Sto-Mir-128-P1  Tgu-Mir-128-P1  Tni-Mir-128-P1  Xla-Mir-128-P1a  Xla-Mir-128-P1b  Xtr-Mir-128-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr19: 42915449-42915507 [+] UCSC Ensembl
Seed CACAGUG
Precursor
(pre-Mir +30nt flank)		 
UCUGCUCAUGGGUCUGUCAGUAGUAGGACAGGGGGCCGUUUCUACUGUCAGAGAUGCUGCCACUCGUCUCACAGUGAACCGGUCUCUUUUCCUGCUAUUCACUUCUGCAAUAAUAUGAG
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Structure
        10          20        30        40        50        60
UCUGCUCAUGGGUCUGUC--|         C         U   U     CA    UGCUG 
                    AGUAGUAGGA AGGGGGCCG UUC ACUGU  GAGA     C
                    UUAUCGUCCU UUCUCUGGC AAG UGACA  CUCU     C
GAGUAUAAUAACGUCUUCAC^         U         C   -     --    GCUCA 
       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-128-P1_5p*
mirBase accessionNone
Sequence 
0- GGGGGCCGUUUCUACUGUCAGAGA -24
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Mature sequence

Dre-Mir-128-P1_3p
mirBase accessionMIMAT0001824
Sequence 
38- UCACAGUGAACCGGUCUCUUU -59
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