MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-128-P1

Family name MIR-128 (all species)
Species Human (Homo sapiens)
MiRBase ID hsa-mir-128-2
Paralogues Hsa-Mir-128-P2 
Orthologues Aca-Mir-128-P1  Ami-Mir-128-P1  Bta-Mir-128-P1  Cfa-Mir-128-P1  Cja-Mir-128-P1  Cli-Mir-128-P1  Cmi-Mir-128-P1  Cpi-Mir-128-P1  Cpo-Mir-128-P1  Dno-Mir-128-P1  Dre-Mir-128-P1  Ebu-Mir-128  Eca-Mir-128-P1  Ete-Mir-128-P1  Gga-Mir-128-P1  Gja-Mir-128-P1  Gmo-Mir-128-P1  Laf-Mir-128-P1  Lch-Mir-128-P1  Loc-Mir-128-P1  Mal-Mir-128-P1  Mdo-Mir-128-P1  Mml-Mir-128-P1  Mmr-Mir-128-P1  Mmu-Mir-128-P1  Mun-Mir-128-P1  Neu-Mir-128-P1  Oan-Mir-128-P1  Ocu-Mir-128-P1  Pab-Mir-128-P1  Pbv-Mir-128-P1  Pma-Mir-128-o1  Rno-Mir-128-P1  Sha-Mir-128-P1  Spt-Mir-128-P1  Sto-Mir-128-P1  Tgu-Mir-128-P1  Tni-Mir-128-P1  Xla-Mir-128-P1a  Xla-Mir-128-P1b  Xtr-Mir-128-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(hg38)
chr3: 35744490-35744547 [+] UCSC Ensembl
Seed CACAGUG
Precursor
(pre-Mir +30nt flank)
AGAGCCCGGCAGCCACUGUGCAGUGGGAAGGGGGGCCGAUACACUGUACGAGAGUGAGUAGCAGGUCUCACAGUGAACCGGUCUCUUUCCCUACUGUGUCACACUCCUAAUGGAAUGC
Get precursor sequence
Structure
        10          20        30        40        50         
AGAGCCCGGCAGCCACU--|UG       A          AUA      AC    GUGAG 
                   G  CAGUGGG AGGGGGGCCG   CACUGU  GAGA     U
                   U  GUCAUCC UUUCUCUGGC   GUGACA  CUCU     A
CGUAAGGUAAUCCUCACAC^GU       C          CAA      --    GGACG 
      110       100        90        80        70          60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-128-P1_5p*

mirBase accessionMIMAT0031095
Sequence
0- GGGGGCCGAUACACUGUACGAGA -23
Get sequence
Proposed targets TargetScanVert: hsa-miR-128-2-5p
miRDB: MIMAT0031095
Mature sequence

Hsa-Mir-128-P1_3p

mirBase accessionMIMAT0000424
Sequence
37- UCACAGUGAACCGGUCUCUUU -58
Get sequence
Proposed targets microrna.org: MIMAT0000424
TargetScanVert: hsa-miR-128-3p
miRDB: MIMAT0000424