MirGeneDB 2.1
MirGeneDB ID

Dre-Mir-128-P2a

Family name MIR-128 (all species)
Seed CACAGUG
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-128-1
Paralogues Dre-Mir-128-P1  Dre-Mir-128-P2b 
Orthologues Aca-Mir-128-P2  Ami-Mir-128-P2  Bta-Mir-128-P2  Cfa-Mir-128-P2  Cli-Mir-128-P2  Cmi-Mir-128-P2  Cpi-Mir-128-P2  Cpo-Mir-128-P2  Dno-Mir-128-P2  Ebu-Mir-128  Ete-Mir-128-P2  Gga-Mir-128-P2  Gja-Mir-128-P2  Gmo-Mir-128-P2a  Hsa-Mir-128-P2  Lch-Mir-128-P2  Loc-Mir-128-P2  Mal-Mir-128-P2a  Mdo-Mir-128-P2  Mml-Mir-128-P2  Mmu-Mir-128-P2  Mun-Mir-128-P2  Oan-Mir-128-P2  Ocu-Mir-128-P2  Pbv-Mir-128-P2  Pma-Mir-128-o2  Rno-Mir-128-P2  Sha-Mir-128-P2  Spt-Mir-128-P2  Sto-Mir-128-P2  Tgu-Mir-128-P2  Tni-Mir-128-P2a  Xtr-Mir-128-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr22: 12374807-12374865 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCGCAGAUGGAGGAGGAGUGCUGGGAGACGGGGCCGUGGCACUGUAUGAGAUUCAUGUAGGCUUUCUCACAGUGAACCGGUCUCUUUUUCCAGCCCUCACUGACAACUCUGAACUAA
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Structure
        10          20        30        40        50          
CUGCGCAGAUGGAGGAG--|  U         C       UGG      AU    UUCAUG 
                   GAG GCUGGGAGA GGGGCCG   CACUGU  GAGA      \
                   CUC CGACCUUUU CUCUGGC   GUGACA  CUCU      U
AAUCAAGUCUCAACAGUCA^  C         U       CAA      --    UUCGGA 
       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-128-P2a_5p*
mirBase accessionMIMAT0031967
Sequence 
0- CGGGGCCGUGGCACUGUAUGAGA -23
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Mature sequence

Dre-Mir-128-P2a_3p
mirBase accessionMIMAT0001824
Sequence 
38- UCACAGUGAACCGGUCUCUUU -59
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