MirGeneDB ID | Dno-Mir-128-P2 |
Family name |
MIR-128 (all species) |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-128-1
|
Paralogues |
Dno-Mir-128-P1
|
Orthologues |
Aca-Mir-128-P2
Ami-Mir-128-P2
Bta-Mir-128-P2
Cfa-Mir-128-P2
Cja-Mir-128-P2
Cli-Mir-128-P2
Cmi-Mir-128-P2
Cpi-Mir-128-P2
Cpo-Mir-128-P2
Dre-Mir-128-P2a
Dre-Mir-128-P2b
Ebu-Mir-128
Eca-Mir-128-P2
Ete-Mir-128-P2
Gga-Mir-128-P2
Gja-Mir-128-P2
Gmo-Mir-128-P2a
Gmo-Mir-128-P2b
Hsa-Mir-128-P2
Laf-Mir-128-P2
Lch-Mir-128-P2
Loc-Mir-128-P2
Mal-Mir-128-P2a
Mdo-Mir-128-P2
Mml-Mir-128-P2
Mmr-Mir-128-P2
Mmu-Mir-128-P2
Mun-Mir-128-P2
Neu-Mir-128-P2
Oan-Mir-128-P2
Ocu-Mir-128-P2
Pab-Mir-128-P2
Pbv-Mir-128-P2
Pma-Mir-128-o2
Rno-Mir-128-P2
Sha-Mir-128-P2
Spt-Mir-128-P2
Sto-Mir-128-P2
Tgu-Mir-128-P2
Tni-Mir-128-P2a
Xla-Mir-128-P2c
Xla-Mir-128-P2d
Xtr-Mir-128-P2
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Vertebrata
|
Genome context (dasNov3) |
JH579355: 1996922-1996977 [-]
UCSC
Ensembl
|
Seed |
CACAGUG |
Precursor (pre-Mir +30nt flank) |
UAAUUGGCCUUGUUCCUGAGCUGUUGGAUUCGGGGCCGUAGCACUGUCUGAGAGGUUUACAUUUCUCACAGUGAACCGGUCUCUUUUUCAGCUGCUUCCUGGCUUCUUUUUACUCA
Get precursor sequence
|
Structure | 10 20 30 40 50
UAAUUGGCCUUGUUCCU--| U UUC UAG CU GGUU
GAGC GUUGGA GGGGCCG CACUGU GAGA U
UUCG CGACUU CUCUGGC GUGACA CUCU A
ACUCAUUUUUCUUCGGUCC^ U UUU CAA -- UUAC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dno-Mir-128-P2_5p* |
mirBase accession | MIMAT0047621 |
Sequence |
0- CGGGGCCGUAGCACUGUCUGAGA -23
Get sequence
|
Mature sequence |
Dno-Mir-128-P2_3p |
mirBase accession | MIMAT0047622 |
Sequence |
35- UCACAGUGAACCGGUCUCUUU -56
Get sequence
|