MirGeneDB 2.1
MirGeneDB ID

Xla-Mir-551-P1b

Family name MIR-551 (all species)
Seed CGACCCA
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-551-P1a  Xla-Mir-551-P2a  Xla-Mir-551-P2b 
Orthologues Ami-Mir-551-P1  Bta-Mir-551-P1  Cfa-Mir-551-P1  Cli-Mir-551-P1  Cmi-Mir-551-P1  Cpi-Mir-551-P1  Gja-Mir-551-P1  Hsa-Mir-551-P1  Lch-Mir-551-P1  Loc-Mir-551-P1  Mdo-Mir-551-P1  Mml-Mir-551-P1  Pbv-Mir-551-P1  Pma-Mir-551-o1  Sha-Mir-551-P1  Spt-Mir-551-P1  Xtr-Mir-551-P1 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030737.1: 70129845-70129902 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAAUUUGGAGCAAAAGCUUGUUCGACCUUGGAAACCAAAGUUGGGUUGGGCCUGUUAGAUUCCAUAGGCGACCCAUACUUGGUUUCAAGGGUUAGCAGGAAUAUCAGAAGCAAACCUG
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Structure
        10           20        30        40         50         
UAAUUUGGAGCAAAAGC---|    C      G        A  -      GG    GUUAG 
                    UUGUU GACCUU GAAACCAA GU UGGGUU  GCCU     A
                    GACGA UUGGGA CUUUGGUU CA ACCCAG  CGGA     U
GUCCAAACGAAGACUAUAAG^    -      A        -  U      --    UACCU 
      110       100         90        80         70          60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Eg He Re St St St St
Star sequence

Xla-Mir-551-P1b_5p* (predicted)
mirBase accessionNone
Sequence 
0- GAAACCAAAGUUGGGUUGGGCCU -23
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Mature sequence

Xla-Mir-551-P1b_3p
mirBase accessionNone
Sequence 
37- GCGACCCAUACUUGGUUUCAA -58
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